Panulirus ornatus (ornate spiny lobster): 139758629
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Entry
139758629 CDS
T10834
Symbol
RfC38
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030
DNA replication
porn03410
Base excision repair
porn03420
Nucleotide excision repair
porn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139758629 (RfC38)
03410 Base excision repair
139758629 (RfC38)
03420 Nucleotide excision repair
139758629 (RfC38)
03430 Mismatch repair
139758629 (RfC38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139758629 (RfC38)
03036 Chromosome and associated proteins [BR:
porn03036
]
139758629 (RfC38)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139758629 (RfC38)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139758629 (RfC38)
DNA Replication Termination Factors
ELG1-RFC complex
139758629 (RfC38)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139758629 (RfC38)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139758629 (RfC38)
Check point factors
HRAD17(Rad24)-RFC complex
139758629 (RfC38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
DUF87
AAA_2
Rep_fac_C
Sigma54_activ_2
ABC_tran
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
139758629
NCBI-ProteinID:
XP_071536238
LinkDB
All DBs
Position
31:149800..178690
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPKELSKLDYHEEQAGHLKKLVEGGDFPHLLVFGPSGAGKKTRIMCLLRELY
GPGVERLRIEHQNFQTPSKKKLEIVSIASNYHLEVNPSDVGIYDRVVIQELIKTVASAQQ
LDTSGQREFKVVILTEVDKLTKDAQHALRRTMEKYMSTCRLILCANSTSKVIPAIRSRCL
GVRVAAPSVEQIVQVLQNVCKKEGLCLPLDLAKRIAEKSNRNLRRALLMCEACKVQQYPF
TPQQDISVPDWETFLKETASKIVEEQSPRRLLEVRERIYELLTHCIPPEVIFKGLLKELV
SNCDGELKCEVTRLTAYHEHRLNLGSKAIYHIEAFIAAFMAMYKKLIEDSMSAAF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgggttgataaataccgaccaaaagaactgagcaagttagattatcatgaa
gaacaggcaggacatttgaaaaagctggttgaaggtggagactttccacacctactagtt
tttggaccatctggagcagggaaaaaaacgcgcatcatgtgtttgctacgtgaactgtat
gggcctggtgtggagagacttcgaattgagcatcagaatttccaaacaccctctaagaag
aaactggaaattgtatctattgccagtaactaccatttggaggtaaaccctagtgatgtg
ggtatctatgatagggtagtgattcaagaactcattaaaactgttgcttctgcacagcag
cttgacaccagtggccaaagagaatttaaagtggtgatcctgacagaggttgacaagctg
accaaggatgcccaacatgcccttcgcaggacaatggagaagtatatgtccacttgccgg
ttgatcctctgtgctaattcaacttcaaaggttatcccagccatccgcagtcggtgtctt
ggagtgagagttgctgctccatctgttgagcagattgttcaagtgttacagaatgtatgt
aagaaggagggtttatgtctaccattagatttggctaaaagaattgcagaaaagtccaat
cgtaacttacgacgagcactactaatgtgtgaggcttgtaaagtacaacagtatccattc
accccacagcaagacattagtgttcctgactgggagactttcttaaaagaaactgcatca
aaaatcgtggaggagcagagccctagaagattactggaagttcgtgaaagaatttatgaa
ctcttgactcactgtataccaccagaagttatttttaagggattgttgaaggagctagta
agtaactgtgatggggaactgaagtgtgaggtaactcgcttaacagcatatcatgaacac
cgtctgaacctgggatccaaggccatatatcacatagaagcattcatagctgcctttatg
gcaatgtacaaaaagttaattgaagatagtatgtctgcagcattctaa
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integrated database retrieval system
