Panulirus ornatus (ornate spiny lobster): 139758651
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Entry
139758651 CDS
T10834
Symbol
me31B
Name
(RefSeq) ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139758651 (me31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139758651 (me31B)
03036 Chromosome and associated proteins [BR:
porn03036
]
139758651 (me31B)
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139758651 (me31B)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139758651 (me31B)
mRNA degradation factors
5'-3' decay
Decapping complex
139758651 (me31B)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139758651 (me31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
139758651
NCBI-ProteinID:
XP_071536305
LinkDB
All DBs
Position
31:complement(1131392..1165272)
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AA seq
443 aa
AA seq
DB search
MADMATIPNHASPIKPVINDQVVKPGDDKSWKAQLVIPPRDRRKRTSDVTDTKGNEFEDF
CLKRDLLMGIFEKGWERPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPLLEQIDPT
QNHIQAMVVVPTRELALQTSHICNELAKHLGVKVMVTTGGTNLKDDIMRIYEVVHAVIAT
PGRILDLMEKKVAVMDKCKMLVLDEADKLLSQDFKGMLDRVISYLPPERQILLYSATFPL
TVKQFKMKHLRSPYEINLMDELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITDLGYSCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPIPK
VIDPALYVAEHHFEDDDEGNISK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatggccactatacctaatcatgcatctcctataaagcctgttataaatgac
caggttgtcaaacctggtgatgacaaatcatggaaggcacagcttgttatacctccaaga
gacagaaggaaacgtacttcagatgtaacggacactaaaggcaacgaatttgaagacttc
tgtttgaaacgggacttgttaatgggtatctttgaaaagggttgggaaagaccgtctccc
attcaggaggcttccattcctgtagcacttagtggaagagatatccttgcacgtgctaaa
aatggcacagggaaaactggggcatactcgattcctttattagagcagattgaccccaca
cagaatcatattcaggcaatggtggttgtcccaacaagagagctggccttgcaaactagt
cacatttgcaatgagttagcaaagcatcttggagtaaaggttatggtaacaactggaggt
accaatttaaaggatgacataatgagaatctatgaagtagttcatgccgtcattgccaca
cctggtagaatattggatctcatggagaagaaagttgcagttatggacaaatgcaagatg
ctggtcttggatgaggccgataaattgctatcgcaggactttaaaggaatgttggatcgt
gtcatctcttacctgccaccggagagacaaatacttttgtactctgcaacatttcctctc
acagtgaagcaattcaagatgaagcatctgagatcaccttatgaaatcaacctgatggat
gaactgacattgaaaggggtaacgcaatactatgcctttgttcaagaacggcagaaagtc
cattgtcttaatactttattctcaaagttacaaatcaaccaaagcatcatcttctgcaac
tcaacccaacgagttgaattactagcaaagaaaataactgatcttgggtattcttgctat
tacattcatgcaaagatggcacaggctcaccgcaaccgtgtcttccacgattttcgagct
ggactttgcaggaacctggtttgctctgatttattcacaagaggaatagacattcaggct
gttaatgtagtcataaatttcgacttcccaaagatggcagagacctatcttcataggatc
ggcaggtctggacgttttggccaccttggtatagcaattaatttaataacgtatgatgac
cgttttgcattacaccgtatagaacaagaattgggaacagagattaaacccattcctaag
gtcatcgatccagccctatatgttgcagagcaccattttgaagatgatgatgagggaaat
atcagcaagtaa
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