Panulirus ornatus (ornate spiny lobster): 139758697
Help
Entry
139758697 CDS
T10834
Symbol
Tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139758697 (Tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
porn03000
]
139758697 (Tbp)
03021 Transcription machinery [BR:
porn03021
]
139758697 (Tbp)
Transcription factors [BR:
porn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
139758697 (Tbp)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139758697 (Tbp)
RNA polymerase III system
TFIIIB
139758697 (Tbp)
RNA polymerase I system
SL1/TIF-1B
139758697 (Tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
VPS13_N
TFIIA
PAT1
DUF4770
Spt20_SEP
YBL010C_LAA2
Motif
Other DBs
NCBI-GeneID:
139758697
NCBI-ProteinID:
XP_071536441
LinkDB
All DBs
Position
31:complement(3172786..3182207)
Genome browser
AA seq
307 aa
AA seq
DB search
MDQMLPSPGFSIPSIGTPLPHSGEEEMILPSAQQQQQQQSVQHHNQQQQQQQQQQQQSQQ
QGQSVAQQQTYTSGFTPHSLMQPHTPSMMSPVVGGGSQVSAGMFGSVTGPSTPVGGPMTP
LTPHSNDPGIVPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTA
LIFSSGKMVCTGAKSEDDSRLAARKYARIVQKLGFPAKFLEFKIQNMVGSCDVKFPIRLE
GLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGQIYEAFENIYPI
LKSFKKQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgctgccatctccggggttcagcatccccagcatagggacgcccctacca
cactcaggggaagaagagatgatcctcccttctgcccagcagcagcagcaacagcagtct
gtgcagcaccacaaccaacaacaacagcagcagcagcagcaacagcaacaatcacaacag
cagggccagtcagtggcccaacagcagacctacacaagtggatttacaccacacagttta
atgcagcctcacaccccgagtatgatgtcacctgttgttgggggtggatcacaagtcagt
gcaggcatgtttggttcagtaacaggaccctctacaccagttggaggccccatgacaccc
ctaaccccacactctaatgacccaggcatcgtaccacagcttcagaacattgtttcaaca
gtaaacctaaattgtaagctcgacctaaagaaaatagcccttcatgctcgaaatgcagag
tataatcccaaacgatttgcagctgttatcatgagaattcgagaaccccgcactacagca
cttattttctcctcgggaaaaatggtttgcactggagcaaaaagtgaagatgactccaga
ttagcagcaagaaaatatgctcggattgtgcaaaagctgggctttcctgcaaagttcctg
gagttcaagatccagaatatggtgggtagctgtgatgtaaagttccccatcagattagag
ggtttggttctcacacacagtcagttcagcagctatgaacctgaactgtttccaggcctc
atctaccgtatggtgaaacctcggattgttctcctcatatttgtgtctggcaaagttgtg
ctgacaggtgcaaaagtaaggggtcagatatatgaagcttttgaaaatatttaccccatc
ttgaaaagcttcaagaaacagtga
DBGET
integrated database retrieval system
