Panulirus ornatus (ornate spiny lobster): 139758708
Help
Entry
139758708 CDS
T10834
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03440
Homologous recombination
porn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139758708 (Top3alpha)
03460 Fanconi anemia pathway
139758708 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139758708 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139758708 (Top3alpha)
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139758708 (Top3alpha)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Topoisomerases
139758708 (Top3alpha)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139758708 (Top3alpha)
FA (Fanconi anemia) pathway
139758708 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-CCHC_2
Zn_ribbon_GRF_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
139758708
NCBI-ProteinID:
XP_071536468
LinkDB
All DBs
Position
31:3397866..3443554
Genome browser
AA seq
1152 aa
AA seq
DB search
MNPYAKSFHLLKVSLSREIATCVSKCPGFRNKVGFPFTGFRKLLYCCLDCNWNQLLHVAT
RYCHSEKTVVNTKMVRILNVAEKNDAAKNLAEIMSRGRYNRRDGFSIYNKIYEFDMVLNG
EPSCMVMTSVSGHLLNHEFTGIYRKWLGCSPLQLFDAPVVKGCSQDMEPIKRTLEREARA
ASRLIIWTDCDREGENIGFEIIDVCKAVKPSLKVLRAKFSEITFPSVQRALQSLGAPDKR
QSDAVDVRSELDLRIGAAFTRFQTLRLQKVFPQALAETLISYGSCQFPTLGFVVERYKAI
QQFIPEPFWKIKVTHAGEEGVIDFSWRRVRLFDRLACQVLFEMCQDDPQAKVTKITTKNK
SKWRPLPLDTVELEKLASRKLRINAKETMKIAEKMYTQGYISYPRTETNIFPKELDLRPL
VEMQTQDPNWGGFAAGVLEEGPHPRQGKKSDQAHPPIHPTKYTNSLHGNEQKIYEFIVRH
FLACISKDAQGLETTVEIEIAGEGFTASGLIILERNYLDVYPYDRWSDKVMPKYEQGQVF
TPTTLDMVDGETSPPALLTEADLIALMEKHGIGTDATHADHIETIKSRMYVGLQDMRFVP
GQLGMGLVEGYDSMGFQMSKPNLRAELEADLKRICIGAKDPKVVLLEQVTKYRDVFEEAL
RQAGKIDEALAQFLNEEPQRRPENEPIPEIPQFTPICKCSSCGCDVVVKEKRDGGRYFVT
CLGFPQCRTTLWLPETVQNITVCEQSCSQCNGSPKKLLFKFRPRSYVPYLPDEYEACLGG
CDQHFLDTLDIRSLSIYTTAVTGGQGSFIPGTGHSSQDRNLDTSSDSGYSSMQMPIIPNT
NQRRIIFGQQNISNSNTGIAGNMDRNNRSSTIWNASNSDSRHQSSSRSCVAPNRGHDSYG
NAFLNSSVASNSLVNNLDSGFSAFGSSHSQFRPSWNGTTNDDRENAIVCNCNEDAIMLTV
RKEGPNTGRQFYKCPKPQGGGCAFFLWADDGENTKSREGSHRGGGGGGGKGGGWGARDGG
GHSISSSGWNRGLTSGFDGSEREAVSVVCNCAIPARRYTVHKEGPNKGRDFYTCSKDRSE
QCRFFKWADEVGDDADGGGTGNTWNNDSGFGRGQGRSSGGMKRKAPEGNKPKKRKCGICG
EEGHNRKNCPLN
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatatgccaagtcttttcatttgttaaaagttagtctcagtagagagattgca
acctgtgtttccaagtgtcctggtttccgaaacaaagttgggttcccatttactgggttc
aggaagttgctgtactgctgcttggactgtaattggaatcagctgcttcatgtcgccaca
cgctattgccatagtgagaagactgtggtcaacaccaagatggttcgcatactcaatgtg
gctgaaaaaaatgatgcagctaaaaatttggctgaaattatgtcaagaggaaggtataac
aggagagatggctttagcatatacaacaagatatatgaatttgacatggtattaaatgga
gagccgtcttgcatggtcatgacatctgtgtctggtcaccttctaaaccatgagttcaca
ggcatataccgcaaatggctcggatgcagtcctctccagctgtttgatgccccagttgta
aagggctgctcccaggatatggagcccattaagcgaacacttgagagggaagctcgagct
gcatctcgtctcatcatttggactgactgtgatcgtgaaggagagaacattggttttgaa
ataattgatgtgtgcaaggctgtcaaaccctcactgaaggtgttaagagccaagttttca
gagattactttcccatctgtgcaacgggcattgcagtctcttggagctccagacaagaga
cagagtgatgctgttgatgttcgaagtgaattagacttacgcataggtgctgcattcacc
aggttccagacactgcgactacagaaggtgtttcctcaggcactggctgagacactcatt
agttatggttcatgtcagttccctactctcggctttgtagttgagcgctacaaggccatt
caacaattcattcctgagccattttggaaaattaaagttactcatgctggggaagagggt
gtgattgatttttcttggcgtcgagtaagattgtttgatcgcttagcatgccaggtgttg
tttgagatgtgccaggatgatccccaggcaaaggttactaagatcaccaccaaaaataag
agcaagtggcggccattacctcttgacacagtggagttagagaagctagcttcacgcaag
ctccgtatcaatgcaaaggaaactatgaaaattgcagaaaagatgtacacacagggttac
atcagctacccacgaactgagaccaacattttccccaaggaactggaccttcgtcccctt
gtggagatgcaaacccaagatccaaactggggagggtttgctgctggtgtactggaagag
gggccccatccacgccagggaaagaaatctgatcaggcacatcctcccattcatcctaca
aaatataccaacagcctacatggcaatgaacaaaagatctatgagtttattgtccgacat
ttcttagcatgcattagcaaagatgcccaaggcttggaaactactgttgagatagaaata
gctggagaagggttcactgcaagtggtctcatcatccttgaacggaactatctagatgtt
tatccttatgatcgatggagtgacaaggttatgccaaagtatgagcaaggccaggttttt
accccaaccacactggatatggttgatggagaaacgtctcctcctgcactgctgacagaa
gcagatctcattgctctcatggagaaacatggcattggaactgatgcaacccatgctgat
cacatagagacaatcaaatcccgcatgtatgtgggactgcaggacatgcggtttgtgcca
ggccaacttggtatgggattagttgaaggctatgattcgatgggctttcagatgtcaaaa
cccaatcttcgggcagaactcgaggctgacttgaaaagaatatgtataggagctaaggat
ccaaaggtggtcctgcttgaacaagtcactaagtatcgggacgtgtttgaggaagcttta
cggcaggctggaaaaattgatgaagctctggcgcagttcttaaatgaggagccacagcgc
cgcccagagaatgagcccatcccagaaatcccacaatttactcctatatgcaagtgttcg
tcctgtggttgtgacgtagtggtcaaggaaaagcgtgatggtggtagatactttgtgacg
tgcttgggtttcccacagtgtcgtaccacactgtggttacctgaaactgtgcagaacatc
actgtgtgtgagcagtcatgctcccagtgtaatggatctcctaaaaaacttctgtttaag
tttaggcctcgttcatatgtcccttaccttcctgatgagtatgaggcatgtctgggtggg
tgtgaccagcactttcttgacacactggacatcagatccttgagtatctacactacggca
gtcactgggggacaaggctcctttataccaggaactgggcattcatctcaggacagaaac
ttggatacctcatcagatagtggatactcttccatgcaaatgcccatcatcccaaacacc
aaccagcgaagaattatcttcggtcagcagaacataagtaactcaaacactggtatagca
ggcaacatggacagaaacaaccgaagcagtacaatttggaatgctagcaacagtgatagc
agacatcagagttccagcagatcttgtgtagcaccaaatagaggccatgacagctatgga
aatgcattcttgaattcttcagttgccagtaatagcttagtaaataacttagactctgga
ttctcagcctttggatcatcacactcccagtttcgtccatcttggaatggtaccacaaat
gatgatcgagagaatgctattgtttgtaactgtaatgaggatgcaattatgcttactgtt
cggaaggaaggccctaatactggtcgtcagttttacaagtgccccaagcctcagggtggg
ggatgtgccttttttctatgggcagatgatggagaaaacaccaagagtagagaaggtagt
catagaggtggagggggaggaggaggcaaaggtggaggttggggagcaagagatgggggt
ggtcactctatttcttcaagtggttggaacagagggttaacttcaggttttgatggcagt
gaaagggaggctgtcagtgttgtctgcaactgtgcaattcctgcacggagatatacagtg
cataaggaaggtcccaacaaaggtcgagatttctacacttgcagcaaggatcgcagtgaa
cagtgccgcttcttcaagtgggcagatgaagttggggatgatgcagatggaggtggtaca
gggaacacgtggaataatgattcagggtttgggcgtggtcaaggaagaagcagtggcgga
atgaaacgtaaagctccagaagggaacaagccaaagaagagaaagtgtggaatatgtggg
gaagaaggacacaatagaaagaattgtccattgaattga
DBGET
integrated database retrieval system
