Panulirus ornatus (ornate spiny lobster): 139758820
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Entry
139758820 CDS
T10834
Name
(RefSeq) transcription factor Sox-3-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
porn03000
]
139758820
Transcription factors [BR:
porn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139758820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Menin
Motif
Other DBs
NCBI-GeneID:
139758820
NCBI-ProteinID:
XP_071536750
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Position
2:complement(99048179..99144234)
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AA seq
442 aa
AA seq
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MLTLDPPDIKGGILNTPHLPPHTTHSVPHAHHNSHSHTYSLSHHSSLTSLNSSLTSSLST
PSLASVGSMTAHSPPQTHVPTPTNNNNSSTNNNNNNNGSANNNSSSNSGGGTKGGSSSSS
SSSAAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPTDPTRPPVQQVTRDMRDMY
NMTNGYMPNGDYSDYGEWRYGYDSAAYGGQSYPYMTGQMYGGYDMTRGYSPTSSTPSYMN
GSYSPAMYASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGASMP
PSATHTTTGEYQSVMKREYGTSGPGQQDLSQMISMYLPGSQERHEQQKAAAAAAYMTHAH
YHAHGATSPDQMPPAPMPLAHM
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttgacccttgacccgcccgacatcaagggcgggatcttgaacacgccccacctgccc
ccgcacacgacccactccgtgccccacgcccaccacaactcgcactcccacacgtactcc
ctctcccaccactcttccctgacctccctcaactcctcgctcacctcgtccctctccacg
ccctccctggcctccgtcgggagcatgaccgcccactccccgccccagacgcacgtcccc
acccccaccaacaacaacaacagcagcaccaacaacaacaacaacaacaacggctccgcc
aacaacaacagctccagcaacagcggcgggggcacgaagggcgggtcctcctcctcctcc
tcctccagcgccgccgctgagagggtcaagcggcccatgaacgcctttatggtctggtcc
aggggccagaggcggaagatggcgcaggagaaccccaaaatgcacaactcggagatctcc
aagcgcctgggcgccgagtggaagctcttgtcggagacggagaagcggcccttcatcgac
gaagccaagaggctgagggcagtacacatgaaggaacatccagactacaagtacagacca
cggcggaagaccaagactctcatgaagaaggataagtacccgctggcctcgggcctcttg
ccgacggacccgacgcggcccccggtccagcaggtcactcgggatatgagggatatgtac
aacatgaccaacggctacatgcccaacggggactacagcgactacggtgagtggcgttat
gggtacgacagcgccgcctacggaggtcagagttacccgtacatgacggggcagatgtac
ggcgggtacgacatgacccgaggttactcccctacctccagcaccccctcctatatgaac
ggctcctacagtcctgctatgtacgcctcggcaccctctccatactccatgagccagatg
gcgtccatggcctccgtgggttcggtcggttcggtgggttcctcggcgtcacactcgccc
acacccatcaagtccgagacgcccacgctgcccgtgtcctcccccggggcctccatgccg
ccctccgccacccacaccacaacaggtgaataccaaagtgtgatgaagcgtgagtacggg
accagtggaccgggccagcaagacctgtcccagatgatctcgatgtaccttccagggtcc
caggaacgccacgagcaacagaaggcagccgccgccgcggcatatatgacccacgcccac
taccacgcccacggcgccacctcaccagaccagatgccgcccgcacccatgcccctcgcc
cacatgtaa
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