Panulirus ornatus (ornate spiny lobster): 139759028
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Entry
139759028 CDS
T10834
Symbol
Tsp
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04145
Phagosome
porn04512
ECM-receptor interaction
porn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139759028 (Tsp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139759028 (Tsp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139759028 (Tsp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139759028 (Tsp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porn04147
]
139759028 (Tsp)
00536 Glycosaminoglycan binding proteins [BR:
porn00536
]
139759028 (Tsp)
Membrane trafficking [BR:
porn04131
]
Endocytosis
Phagocytosis
Opsonins
139759028 (Tsp)
Exosome [BR:
porn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139759028 (Tsp)
Exosomal proteins of colorectal cancer cells
139759028 (Tsp)
Exosomal proteins of bladder cancer cells
139759028 (Tsp)
Glycosaminoglycan binding proteins [BR:
porn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139759028 (Tsp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
139759028
NCBI-ProteinID:
XP_071537030
LinkDB
All DBs
Position
32:7234655..7268853
Genome browser
AA seq
831 aa
AA seq
DB search
MSNGDIPIIHEDETSIKLVKTLTELIETIKELQIEIQTQREETALLRDALLNCEACKPDN
DPCSPNPCYPGVECMGGPDGARCGPCPRNFIGDGHNCEPAITCADRPCARGVRCYDTSVG
YRCGPCPPGQTGDGHTCSPISACDPNPCFPGVQCSNINSDPYYRCGPCPPGFTGNGTICE
DIDECELASPCDPRVRCINMSPGFRCDPCPAGFTGSPGLQGIGLQFARQNRQRCYDLDEC
DDGQNGGCVRNSECINTEGSYFCGECNTGFLGNQSVGCHNRPDVCPDGLRCDKHAVCIMP
YGLNKYICKCNVGWAGDGQVCGPDVDLDGQPDEEQPCSSRSCRQDNCVSTPNSGQEDTDN
DNIGDACDNDADNDGIPNSPDNCPLVSNPDQADTDPDGADDQGDACDNCPTVPNLDQEDT
DKDGIGDACDPDIDDDGIVNRQDNCPRTPNPDQLDTDRDGLGDACDNCPKVRNPGQQDID
KDLVGDACDTNDDMDGDGVQDDNDNCPTTANSDQHDADEDGRGDACDPDADNDDIPNGMD
NCMLVYNPDQRDSDGNGVGDICEGDQDADKVNDFQDNCPNNSMIYATDFRQYQTVILDPE
GDSQIDPNWVIYNKGAEIVQTMNSDPGLAVGYHRFGGVDFEGTFFVDTEIDDDYVGFIFS
YQDNANFYTVMWKKNTQTYWQATPFRAVAEPGIQLKLVQSSTGPGQMMRNSLWHTGDTED
QVKLLWKDPRNVGWKEKTAYRWLLLHRPKIGLIRLRIFEGENMVADSGNIYDGKLKGGRL
GVFCFSQEMIIWSDLVYRCNDQVPEAIFNQLPPELKPYVDIDISRPITNGV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacggagacatacccatcatacatgaagacgagaccagcatcaagctggtcaag
accctgactgagctcatcgagaccatcaaggaactacagatcgagatccagacacagcgc
gaggagacagccctgctgcgtgacgctctgctcaactgcgaggcctgcaaacctgacaat
gacccgtgttcgcccaacccttgctacccgggcgtcgagtgcatgggcggtcccgacggg
gctcgctgtgggccctgcccgaggaacttcatcggcgacggacacaactgcgagccggcc
atcacctgcgctgaccgaccctgcgcccggggcgtgcgttgctacgacacgtccgtcgga
taccggtgcggtccgtgtccccctggccagacgggcgacggccatacctgtagccccatc
agtgcctgcgaccccaacccctgcttcccgggcgtccagtgctccaacatcaacagcgac
ccgtactaccgctgcggtccctgcccgcccggcttcaccggcaacggcaccatctgtgag
gacattgacgagtgtgagctggcatcaccctgtgacccacgcgtgaggtgcatcaatatg
tctcccgggttccgctgtgacccgtgcccggccgggttcaccgggtcccctggcctacaa
gggattggccttcagttcgcccgccagaaccgacagcggtgttatgacctggacgagtgc
gatgacggacagaacggtggctgtgtcagaaactctgagtgtatcaacaccgagggctcc
tacttctgtggggagtgtaacactggcttcctggggaaccagtcggttggctgccacaac
cgacctgacgtctgcccagatggcctaaggtgcgacaagcacgccgtctgcatcatgcct
tacggcctgaacaaatacatctgtaagtgcaacgtgggttgggctggcgacggccaggtc
tgtggacctgacgtggacttggacggccagccggacgaagagcagccctgctctagccgc
tcctgtcgccaggacaactgcgtctccaccccgaactccggccaggaggacacggacaac
gacaacatcggcgacgcctgcgacaacgacgcggacaacgatggtatccccaacagcccc
gacaactgcccgctcgtgtccaaccccgaccaagccgacacggatcccgacggcgccgac
gaccagggcgacgcctgcgacaactgcccgaccgtgcccaacctcgaccaggaggacacc
gataaggacgggatcggcgacgcctgtgaccccgatattgatgacgatggaatcgtgaac
cggcaggacaattgcccgaggacgcccaaccccgaccagctggacacggaccgggatggc
ctgggcgacgcctgcgacaattgccccaaagtccgcaacccgggccagcaggacatcgac
aaggacctggtgggcgacgcttgcgacaccaacgatgatatggacggcgatggcgtccag
gacgacaacgacaactgcccgaccacggccaacagcgaccagcacgacgccgacgaagat
ggtcggggcgacgcctgcgacccggacgccgataacgacgacatccccaacgggatggac
aactgcatgctggtgtacaaccccgaccaacgcgactccgacggcaacggcgtcggcgac
atctgtgagggagaccaggacgccgacaaggtcaatgacttccaggataattgccccaac
aactcgatgatctacgccaccgacttcaggcaataccagacggtgatcctagaccccgag
ggagactcgcagatcgaccccaactgggttatctacaacaagggagccgagatcgtccag
acgatgaactccgaccctggcttggctgtaggttatcatagattcggaggcgtcgacttc
gaaggcaccttcttcgtggacacggaaattgacgatgactacgtcggcttcatcttcagc
taccaggacaacgccaacttctacaccgtcatgtggaagaagaacacgcagacgtactgg
caggcgacgcccttccgtgcggtggctgagccgggcattcaactcaaactggttcagtcg
tccaccggccctggccagatgatgaggaactccctgtggcacacgggagacaccgaggac
caggtgaaactgctctggaaggatccccgtaacgttggctggaaggagaagacagcctac
cgctggctcctcctccaccgtcccaagatcggcctcatccgtctacgtatcttcgagggc
gagaacatggtggccgactccggcaacatctacgacgggaaactgaagggcggtcgcctg
ggagtcttctgcttctcccaagagatgatcatctggtcggatcttgtctaccgctgcaac
gaccaagttcccgaggccatcttcaaccagctgccgcccgaactcaagccctatgtggat
atcgatatctccagacccataaccaacggcgtataa
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