Panulirus ornatus (ornate spiny lobster): 139759861
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Entry
139759861 CDS
T10834
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139759861 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porn03009
]
139759861 (smid)
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139759861 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_28
AAA_22
AAA_5
AAA_33
RuvB_N
AAA_18
nSTAND3
Mg_chelatase
RNA_helicase
NACHT
Rad17
TsaE
ABC_tran
IstB_IS21
DUF815
AAA_14
Sigma54_activ_2
AAA_24
AAA_19
AAA_2
AAA_17
AAA_25
TIP49
Zeta_toxin
ATPase
AAA_7
Sigma54_activat
AAA_29
PduV-EutP
NPHP3_N
Parvo_NS1
NTPase_1
AAA_30
RsgA_GTPase
AAA_23
T2SSE
APS_kinase
CobU
CPT
UBA2_C
Motif
Other DBs
NCBI-GeneID:
139759861
NCBI-ProteinID:
XP_071538475
LinkDB
All DBs
Position
34:complement(12640426..12668355)
Genome browser
AA seq
786 aa
AA seq
DB search
MKRPYFQERSLLPRVEKYMEENEFIDVEEMTVYLMDNYREFHRKSKKAFMKSVEKAHKWL
QHCYQLTDEVDDHEDILDSDGGGSDIMEIIEPEPKVETNSLNTALRKMYKPPSVPSSTST
PLSKRNGDFYVLDTDGDRSVSGIKSTENSLKKKRKRGKEGAIEEAVKKKKLLPEESKITF
AQMAGIESLKDKICDLIANLRWPGILQPLQKSVLLTGPSGSGKTTFAQALAGTAESPVLR
VTATELVGGVSGESEERINEIFEQAASLTRCVLLIEKIDVVVPKEGSTKSLERRIGAQLT
SCLNALKSKHRDKQLLVMGETSHPENLDWDLRSSFDGEIFMAIPTEAARAQILQLICEGT
SFVGDFEELAHRTPGYVAGDLKKLLENAQGLAWKRKKESLAGKTEEGNLMEQLKRFMIHF
EKMCEAEEGNIIVTINMEDFMEALMLITPALKREGFPTVPDVTWEDIGGLEDVKEELREK
ILDPIKYAKLHEEFGASRPNGILMWGPPGCGKTLLAKAVANEAGINLLPVMGPELLNMYQ
GESERAVREVFKRARNVAPCVIFFDEFDSLCPVRSKGAESGSKTTIVNTLLTEMNGFTKR
EDVYIVAATNRPDILDPAVTRPGRFDTLLYVDVPDHLGRISIFQARTKNGTCPNLAPDVS
LEEVSHFCDNFSGADCDQLVYLASKEAIREVINNNAAFTPTCAPTSEGPVKRLVARRHFS
AALKKIKPSITVEEQKRYKKLHSKMEASKVQGELSGFPEDIGSLAENSERQSQPLDVKDN
DLDQNK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaccatattttcaagaaagatccctcttaccaagagtggaaaagtacatggaa
gaaaatgaatttattgatgttgaggaaatgaccgtttacctgatggacaattatcgtgaa
tttcataggaaaagtaaaaaggcattcatgaagagtgttgaaaaagctcataagtggctt
cagcactgttatcagctgactgatgaagtggatgaccatgaagacatcttggatagtgat
ggtggtggctcagatatcatggaaataattgaacctgagcctaaagttgagaccaatagc
ctgaatactgcactgagaaaaatgtacaaaccaccatcagtgccttcatcaacctcaaca
cccctatcaaagagaaatggagatttctatgttttggacactgatggtgatcgctctgta
agtggtataaaatctactgagaatagtttaaagaaaaagcggaaaaggggaaaggaaggt
gcaatagaagaagcagttaagaaaaagaagttactgcctgaagaatcaaagattacattt
gcacaaatggctggaatagaatctttgaaagataaaatatgtgaccttatcgctaatctg
cgatggccaggtattcttcaaccccttcagaagtctgtgttgttaacagggccatctggc
agtggtaaaacaacatttgctcaagctctggctgggacggcagagtcaccagttctacga
gtcacagcaacagaattagtgggtggagtttctggagaaagtgaggagaggattaatgaa
atttttgaacaggcagcatctcttacccggtgtgttcttctgattgagaagatagatgtt
gttgtcccaaaagaaggaagtactaagagcttagaaagacgaattggtgctcaactcacc
tcctgcctgaatgctttgaagagtaagcacagagataagcagttgttagtcatgggagaa
accagccatccagagaacttggactgggatcttcgtagcagcttcgatggagagatattc
atggctatcccaacagaagcagcccgtgcacagatcttgcagctgatttgtgaaggaaca
tcatttgtcggtgattttgaggaattagcccacagaactcctggctacgtggcaggagac
cttaagaagttgttggaaaatgctcaaggtctggcatggaagagaaagaaagagtcatta
gcaggaaaaactgaagaagggaacctcatggaacagctgaagagatttatgatccacttt
gagaagatgtgtgaggcagaggaaggcaacattattgtcaccatcaatatggaagatttt
atggaggcattgatgctcatcactccagcattaaagagagagggctttcccacagtccca
gatgttacatgggaggatattggaggtcttgaagacgtaaaagaggagctgagagagaag
attcttgaccccatcaaatatgccaagttgcatgaagaatttggagcaagtcgtcctaat
gggatcctgatgtggggtcctccaggatgtggcaagacactcttggctaaagctgttgca
aatgaggctgggatcaacttactgccagtaatgggaccagaacttttgaacatgtatcag
ggtgagagtgagagagccgtgcgagaagtattcaaacgtgcacgcaacgttgctccatgt
gtaattttctttgatgaatttgattcactttgtcctgtcagaagcaaaggagctgaaagc
ggcagtaaaaccaccattgtgaacactttgcttacggaaatgaatggcttcacaaaacgt
gaggatgtatacattgtagctgcaaccaatcgtccagacatccttgacccagcagtgaca
cgtccaggaaggtttgacacacttctttatgtagatgtgcctgaccacctaggaaggata
tccatttttcaagctcgaacaaaaaatggcacatgtcctaatttagctcctgatgtcagt
ttggaagaagtgtcccatttctgcgataacttctctggtgcagattgtgaccagctagtg
tacttagccagcaaggaagctataagggaggtgatcaataacaatgcagccttcacacca
acatgtgcaccgacatctgaaggtcctgttaagcgccttgtggccaggagacatttttct
gcagcattaaaaaaaattaagccttctattacagttgaggagcagaaacgatacaagaag
ctgcatagcaaaatggaggcatcaaaagtgcaaggggagctttcaggattcccagaagat
ataggatctttggctgaaaattctgaaagacagtctcagccactggatgtaaaagacaat
gatttggatcagaataaataa
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