Panulirus ornatus (ornate spiny lobster): 139760001
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Entry
139760001 CDS
T10834
Symbol
Atg16
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04136
Autophagy - other
porn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139760001 (Atg16)
04136 Autophagy - other
139760001 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139760001 (Atg16)
03029 Mitochondrial biogenesis [BR:
porn03029
]
139760001 (Atg16)
Membrane trafficking [BR:
porn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
139760001 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
139760001 (Atg16)
Mitochondrial biogenesis [BR:
porn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139760001 (Atg16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
eIF2A
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_SPT8
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Cytochrom_D1
Ald_deCOase
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
139760001
NCBI-ProteinID:
XP_071538848
LinkDB
All DBs
Position
3:complement(2278836..2390830)
Genome browser
AA seq
558 aa
AA seq
DB search
MMAWNKSNEGDWRQIIYYKLRERNKKEFENISDLLQLHNRLFEQSESLRTENLQLTLQNE
KLRQANTELQSQGCGSSGSEGGGASSVVVQALEQKVYKLQEELTDLHRRKGENAQQLVEL
NQCLQERDKILAVKENKLAEYESDLLILREDLAAKESTIADIQAVNQVLRDEYQTLNLAF
TALEDKYRKAQEENRELIDRWMAQKAKDAERLNMENDTVLKKRQMMLEEQLKEAAREPKQ
VTTDDKFACSPPICLTAVLPAKAYLKYDAHDGEVNSVCFSPQGRILATGGVDRKLKLWDI
NRSVVEPKGLLTGSNAGVTAIDFDAEESLILGASSDFASRVWTVVDHRLRHTLTGHSGKV
MAARFLSESAKVVTGSHDRTLKIWDLRSRSCIRTIFAGSSCNDLVPSDSAATTIISGHFD
KKIRFWDTRTEQSANEVPLQGKITSLSLSRDGFYLLSCVRDDSLKILDLRKNQVVNTFTG
DGFHVGADYTRAAFSPDASYVAAGSGDGTVYIWNVNCGKLERTLREHTACVVACTWHPNG
KSLVSCDRAKKVIAWSDF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggaacaagtctaatgaaggcgattggcgacaaattatttactataaactt
cgagaacggaataagaaggaatttgaaaatataagtgatcttcttcaattacataatcgt
ctctttgagcaaagtgaatcattaagaactgagaatctacagctgactctccaaaatgag
aagctacgtcaagcaaataccgagttgcagagtcaaggatgtggcagtagtggcagtgaa
ggtggaggagcctcatcagtggttgttcaggccttggagcaaaaagtttataaattgcaa
gaagagttgacagatttgcacagacggaaaggtgaaaatgcacagcagctggtagagtta
aatcaatgcctccaggagcgggataaaattttagctgtgaaggaaaacaaattggcagag
tatgagtcagatcttttaattctaagagaagacctggcagcgaaagagtctacaattgca
gatatccaggctgtgaaccaagttcttagagatgaatatcaaactcttaacctagcattt
actgcacttgaagataaatatagaaaagcacaggaagaaaatcgagagctgattgaccga
tggatggcacagaaggcaaaagatgcagaaagacttaatatggaaaatgatacagttctt
aagaagcgacagatgatgcttgaggagcaactgaaagaagcagcacgagaaccaaagcaa
gtgactactgacgataaatttgcctgcagtccacctatctgtctcactgctgttctacct
gccaaagcataccttaaatatgatgcacatgatggagaagtgaattccgtctgcttcagt
ccacaaggaagaatattggcgacggggggtgttgacaggaaattgaagctttgggatatc
aatcgttcagtggtagaaccgaaagggttgttaactggtagcaatgcaggagtgacagcc
atagactttgatgcagaagaatcactcatcctaggtgcctcaagtgactttgccagcaga
gtgtggacagttgtggatcatagattaagacacactctaactggccactcgggtaaagta
atggcagcaagatttttatcagagtcagctaaagtggtgacggggtctcatgatcgcacc
ttgaagatatgggatcttagaagtcgttcatgtataagaacaatctttgctgggtcaagc
tgtaatgaccttgtaccatctgacagtgcagcaacaactattatatcaggtcattttgat
aagaagatcagattttgggatactcgaactgaacaatctgcaaatgaggtgccactccaa
ggaaaaataacttctctatccttatcaagagatgggttttacttactaagttgtgtacga
gatgattctctgaaaatcttagaccttagaaaaaatcaagttgtaaatacattcactggt
gatggcttccatgtaggagcagactacacaagagcagcattttcaccagatgctagctat
gttgcagcaggcagtggtgatggtactgtctatatatggaatgttaactgtggcaagctt
gaaaggactctgagggaacatacggcctgtgtcgtcgcatgcacctggcatccgaatgga
aaatcacttgtgtcctgtgatcgagctaaaaaagtcatagcttggtcagatttttga
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integrated database retrieval system
