Panulirus ornatus (ornate spiny lobster): 139760105
Help
Entry
139760105 CDS
T10834
Symbol
Polr2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03020
RNA polymerase
porn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139760105 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
139760105 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139760105 (Polr2A)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139760105 (Polr2A)
Enzymes [BR:
porn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139760105 (Polr2A)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
139760105 (Polr2A)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
139760105 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
EutB
Motif
Other DBs
NCBI-GeneID:
139760105
NCBI-ProteinID:
XP_071539046
LinkDB
All DBs
Position
35:6419610..6443372
Genome browser
AA seq
1916 aa
AA seq
DB search
MAAESKAPLRAIRRVQFGILSPDEIRRMSATEGGIKYAEVYENGRPKLGGLMDPRQGCID
RNTRCTTCAGNMTDCPGHFGHLDLAKPVFHVGFITKTMKILRCVCFYCSKLLFNAQYPKI
REIVTKSKGQPRKRLQHVYNLCKGKMICEGGDEIDVTKDPEDPSLAKKGTGHGGCGRYQP
NIKRVGLELIAEWKHVNEDTQEQKQILTAERVYEIFKHISDEECYLLGMDPKYARPDWMI
LTVLPVPPLPVRPAVVMHGSARNQDDLTHKLADIIKANNELIRNEQSGAAAHIIVENLKM
LQFHVATLCDNDMPGMPRALQKSGRPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITA
DPNLRIDQVGVPRSIAQNLTYPEIVTPFNMTKMIELVKRGNNQYPGAKYIVRDNGARIDL
RYHPKPSDLHLQCGYKVERHITDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVT
SPYNADFDGDEMNLHVPQSMETRAEIENLHVTPRMIITPQANKPVMGIVQDTLTAVRKMT
KRDVFLEKHEMMNLLMFLPIWDGRMPQPAILKPKPLWTGKQLFSLIIPGNLNLIKTHSTH
PDDEDDGPYKWISPGDTKVLVEHGELIMGILCKKTLGASSGSMLHVAWMELGHEIAGRFY
GNIQTVINNWLLLEGMSIGIGDTISDPATYRVIQDTIRKAKEDVIEVIHKAHNDELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVSQVIQLRYGEDGLAGEYVEFQKMPTV
KLSNRRFEEKYRFDVTNERYLRRLFNEDVIRELIGSPEAISILEEEWQKLQEDRMGLREV
FPKGDTKVVLPCNLERMIWNVQKIFHINKRTPTDLSPIRVVEGVKDMLNKCVIVTGEDRI
SLQANENATFLFQCLVRSTLCTKKVAEEYKLTSESFNWLVGEIETRFHMAIAAPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLVGASAR
DAEKAKNVLCRLEHTTLRKVTSNTAIYYDPDPQNTCITEDQEFVNVYYEMPDFDVSRISP
WLLRIELDRKKMTDKKLTMEQISQKINSGFGDDLNCIFNDDNAEKLVLRIRIIVGDDKLT
DDAEEQVDKMEDDTFLRCIEANMLNDLTLQGIEAITKVYMHLPQTDEKKRIIINDQGEFK
AIAEWLLETDGTALMKVLSERDVDPVRTTSNDILEVFEVLGIEAVRKCIEKEMNAVLMFY
GLYVNYRHLALLCDVMTSKGHLMAITRHGINRQDTGALMKCSFEESVDVLMEAASCAEVD
PVRGVSENIMLGQLPKIGTGSFDLVLDDAKCKFGMEIPMPGSGMMMGGGIFGAASPSSGM
TPAQTPWSSGATPSMSPYGAWTPGVGSGMTPGGPSFSPAAASETTGLSPGYSPAWSPQPG
SPGSPGAMSPYFPSPANVLSPSYSPSSPAYHPASPSMTPASPGYSPTSPTYSPTSPQYSP
TSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYAPNYSPSSPG
YSPTSPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPTYSPGSPSYSPT
SPKYSPTSPTYSPTSPSYSPSSPKYSPTSPNYSPTSPKYSPTSPTYSPSSPQYSPTSPKY
SPTSPTYSPSSPKYSPTSPTYSPTTPGFSPTSPLYSPSFEEDEEEQRRKQKKKSKR
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagagcaaagcccccttgcgggctatccggcgggtgcagtttggtatatta
agtccagatgaaattcggcgtatgtcagcaacagaaggaggaattaaatatgctgaagtg
tacgaaaatggacgccctaagttaggaggactgatggatccacgacagggttgtattgac
aggaacacacgctgcacaacatgtgctggcaacatgacagattgtcctggccattttgga
cacctggatctggcgaagccagttttccatgtgggatttattacaaaaaccatgaagatt
ctgcgatgtgtctgcttttattgtagcaagcttctcttcaatgcacaatacccaaagatt
cgtgagattgtgacaaaatcaaaaggacagcctcgaaaacgtctgcagcatgtctacaat
ttgtgtaaggggaagatgatctgtgaaggaggagatgagattgatgtcaccaaagatcca
gaagaccccagcttggcaaaaaaaggaactggccatggtggctgtggtcgttatcagcca
aacatcaaacgtgtgggattggaactcatagctgaatggaagcatgtaaatgaagatacc
caagaacagaaacagatactcactgctgaacgagtgtatgagatattcaagcacatatca
gatgaggagtgttacttattgggtatggaccccaaatatgcccggcctgattggatgatt
ctgacagtgttacctgtgccacccctacctgtacgacctgcagttgtcatgcatgggtca
gcgcgtaatcaagatgatcttactcacaaattagcagatatcattaaggccaacaatgaa
ctcatacgcaatgaacagtctggtgcagcagctcacataattgtggaaaatctgaagatg
ctccagtttcatgtagcaacactgtgtgataatgatatgcctgggatgcccagagcccta
caaaagtctggtaggcccctcaaagctatcaaagctcgcctaaagggcaaagaaggaagg
attcgtggcaatcttatggggaaacgtgttgatttttctgctcgtactgtcatcactgct
gatcctaaccttcgcattgaccaagttggtgtgcctcgatctattgcccagaatcttact
tacccagaaatagtaactccatttaatatgaccaaaatgatcgagctcgtgaagcgtggc
aacaatcagtatccaggagccaagtacattgtacgtgacaatggagctcgaatagatttg
cgttaccacccaaagccctctgatcttcaccttcagtgtggttacaaagttgagagacac
attacagatggggatttggtaattttcaaccgtcaacccactttacataaaatgtcaatg
atgggacaccgagtaaaggttttgccatggtcaaccttccggatgaatctgtctgtaacg
tcaccatataatgctgattttgatggagatgaaatgaacttgcatgtacctcaaagtatg
gagacacgagcagagattgagaacctccatgtaacaccccggatgattataactccgcag
gccaacaaaccggtcatgggtattgtgcaggacaccctcacagctgtcagaaaaatgaca
aagcgtgatgttttcttggagaagcatgaaatgatgaacctgctgatgttcttgcctatt
tgggatggtcgtatgcctcagccagcaatccttaaacccaaaccactttggacagggaaa
cagctcttctctctcatcattcctggtaatcttaatctcataaaaacacattcaacccat
cctgatgatgaagatgatggaccatacaagtggatttcccctggggatacaaaggtactg
gtggagcatggagaattgatcatgggtattctgtgcaagaagactcttggtgcctcatct
gggtccatgttgcatgttgcatggatggaactgggacatgaaatagctggcagattttac
ggtaacattcagactgttattaacaactggttgctcctggagggcatgagcattggaatt
ggtgataccatttctgatccagctacataccgtgttattcaggacaccattcgcaaagcc
aaggaggatgtgatagaagtaatccacaaggctcacaatgatgagcttgagcctactcca
ggtaacacactgaggcagacctttgagaatcaagtaaatcgtatcctaaacgatgctcga
gacaaaactggtggttctgccaagaagtcattgactgaatataataacctgaaagctatg
gtggtttcaggttcaaagggatccaatattaacatctctcaggttattgcttgtgtgggg
caacagaatgttgaaggaaaaagaattccatttggtttccgaaaaagaacacttcctcac
tttatcaaggatgattatggtccagaatcccgtgggtttgtggagaactcataccttgcc
ggtttaaccccctcagaattttatttccatgctatgggtggtcgtgagggtctcattgat
actgctgtgaagactgcagaaactgggtacatccagcgacgtttgattaaggctatggag
agcgtaatggtaaattatgatggcacagtcagaaacagtgtgagtcaagtgattcagctc
aggtatggtgaagatggcttggctggagagtacgtagagtttcagaagatgccgactgtc
aagctttcaaatcgccgatttgaagaaaagtatcgttttgatgttaccaatgaaagatac
ctacgaagactgtttaatgaggatgttatccgggaactgattggatcaccagaggctatt
agtatccttgaagaagaatggcagaagcttcaggaagatagaatgggactgcgagaagtt
ttccccaagggtgacacgaaagtggtacttccttgcaacttggagcgaatgatttggaat
gtacagaagattttccacataaacaagcgtactccaacagacctgtctcccattagagtg
gtggaaggtgtaaaggatatgttaaataaatgtgttattgtgactggtgaagacaggatc
agcttacaggccaatgaaaatgctaccttccttttccagtgcttagttcgatcaactttg
tgcactaagaaagtagctgaagagtacaaacttacttctgaatccttcaactggcttgtt
ggtgaaattgaaaccagattccatatggcaattgctgctccaggagaaatggtaggagct
ctagctgcccagtcacttggtgaacctgccactcagatgacactgaacactttccatttt
gctggtgtatcatccaaaaatgtaacattgggtgtgccaaggctaaaggaaatcattaac
atcagtaagaagcccaaggctccttctcttacagtgttcttggttggagcctcagccaga
gatgctgagaaggctaagaatgtattgtgtcgactggaacataccacattgcgtaaggta
acatccaacactgctatctactatgatccagacccccagaatacttgcattacagaggac
caagagtttgtcaatgtttactatgagatgcctgactttgatgtgtccaggatatcccct
tggcttcttcgtattgagcttgaccgcaaaaagatgacagataagaagttgactatggag
cagatttcccaaaagataaattcaggttttggagatgatttgaactgtatctttaatgac
gacaatgctgagaaacttgtgctgcgcattcgcattatagtcggtgatgataagctaact
gatgatgctgaggaacaggtggataaaatggaggatgatactttcttgcgatgcattgag
gcaaacatgttgaatgatctgacactacagggcattgaggccatcaccaaagtgtatatg
cacttgcctcagactgatgaaaagaaacgaattattatcaatgaccaaggagagtttaag
gcaatagcagagtggctgcttgaaactgatggtactgctctgatgaaagttctttcagag
agagatgtagacccagttcgaaccacttctaatgacatcttggaggtgtttgaagtactt
ggcattgaagctgtccgaaaatgtattgagaaggaaatgaatgctgtgctaatgttctat
ggtctgtatgtgaactaccgccatcttgccttgctttgtgatgtgatgacaagcaagggg
cacttgatggctatcacacgtcatggtatcaacaggcaagatactggtgcactcatgaag
tgttcatttgaggagtctgttgatgtgttgatggaagctgcatcctgtgcagaagtagac
cctgtccgaggtgtgtctgaaaatattatgttaggccagctccccaagattggcacgggt
tcttttgacttagtgctagatgatgcaaagtgcaagtttggtatggaaattcccatgcct
ggatctggcatgatgatgggtggcggaatttttggagcggcatctccatcatcaggtatg
acacctgctcagaccccatggtcctcaggagcaacaccatcaatgtcgccatatggtgca
tggaccccaggtgtaggaagtggaatgacaccaggtggaccatccttctccccagctgct
gcaagtgaaaccacaggcctgtcaccagggtattctcctgcttggtctccacagcctggg
agcccaggatctccgggtgccatgagtccatatttcccaagcccagctaatgttctgtcg
ccctcatactccccatcatcaccagcataccatccggcttcacctagtatgactccagct
tcaccaggatattccccaacatctcctacatacagtccaacaagcccacagtactcccca
acttcaccacagtattctccaacaagcccatcttactctcctacatcaccatcttacagt
cctacttctccctcatactcacccacttcaccatcctattctccaacttccccttcttac
tcaccaacttctccttcctactctcccacttccccctcttactcgccaacttcaccatct
tattctcctacaagcccatcttattctcccacctctcctagctacagccccacttctcct
tcctattcccccaccagtccttcatactctcctacatctccatcctactctccaacctcc
ccatcttactcacccacttccccaagctatgctccaaactattctccatcatctcctggt
tattctcctactagtccatcctactctccaaccagtccatcttattctcccagctctccc
cagtactccccagcatcaccatcttattccccatcatctcccaaatattctccaaccagt
cccagctattccccaaccagccccacttactcaccaggatcaccttcttattctcctact
tcaccaaaatattccccaactagtccaacttattcacctacttctccatcttactccccc
tcttccccaaaatattcaccgacatcacccaactactctccaacatcacccaagtactca
cctacatcacccacttacagcccctccagtcctcagtatagccccactagtcccaagtat
tccccgacttctccaacttacagtccaagtagccccaaatatagtccaaccagccccact
tatagcccaactactccaggttttagtccaacttctcccttgtattccccaagttttgaa
gaagatgaagaagaacaaaggagaaaacagaaaaagaaatcaaagcgctaa
DBGET
integrated database retrieval system
