Panulirus ornatus (ornate spiny lobster): 139760138
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Entry
139760138 CDS
T10834
Symbol
Cnot4
Name
(RefSeq) uncharacterized protein Cnot4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139760138 (Cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
porn03000
]
139760138 (Cnot4)
03019 Messenger RNA biogenesis [BR:
porn03019
]
139760138 (Cnot4)
04121 Ubiquitin system [BR:
porn04121
]
139760138 (Cnot4)
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139760138 (Cnot4)
Transcription factors [BR:
porn03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
139760138 (Cnot4)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139760138 (Cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139760138 (Cnot4)
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139760138 (Cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_2
zf-UDP
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
139760138
NCBI-ProteinID:
XP_071539127
LinkDB
All DBs
Position
35:complement(11257847..11485620)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSVLNLSEDMVECPLCMEPLEMDDLNFFPCTCGYQICRFCWHRIRTDENGLCPACRKAYP
ENPADFKPLSHEELQRIKQEKRQKDAQRKQKVTENRKHLANVRVVQKNLVFVVGLSARLA
DAETLKKPEYFGKFGKIHKVVINHSTSYAGSQGPSASAYVTYQRAEDALRAIQAVNNIHV
DGRTLKASLGTTKYCSHFMKNQPCPKSECMYLHELGDESASFTKEEMQQGKHQEFEKKLQ
EQYLGSPPSEKNSTTVPPPQPATSGNPSSNKRTSSGGGKENNAPKSQQESITPNPNTGEA
WPSLNSTATKESKKSKGSKSDRSNGSARHTPTDEHNNNNNNNNNNNINSKRGSKERERSC
NTGSSSSSSSSSSSSSSSSSGSSSSSSNGLGVDMMNHSVSPVATSSPSSGHESCTSSAST
TPPPSFDTPLIPPSPPPCSSSPVPVSCVQDLCQEETSPIPTPPSSLSSSSEPSSSLPLPQ
QLSRSAAAAASLFSDNSNSFFSSGPSLPLQRSTPPLPPSSSPQQNHQLHNSHASSHKHTQ
HDTTADWANKTSEAYDMDSMFPSQNHSNSTWNCIFDFEKSEDMTRVGYLVDDELGFDPFE
ETNKALAEDIKIEQKQQQQLQRHQQQFSHPQHHQHQSQLQPQHHQQQQQQQQLRAGLKSL
MDYSSTSGQSRARLPPPGFNGLNSFNSYSMPRLSQPEPSKLLPPFLSGLAGNPNLGTPGL
GSTPSVPPSLNGLVGSSGLGVPPGLSGSLLGSSNTSGLGNGGVPGGLGNGVPPHLLSPAS
LLSMDTPLSASQGPPGIGLPKGDAFLLKDLENGLRNIFPAISSVSTMNTINTVNTLNSLA
GGANNPTSQNNPLTNFLNMAHQHQQHHHHQQHQQQHPSQQSLLQQLTMSSLANSHKGWSN
SGAPDLTVLDPAIVSSGQLTDSRSDSPPHWMKTMEQLTEGGPHPLWNNLVPYGLTSSGLP
TGINPHSGSSCPTAPTQRSVAPMWPQTSPPPGFSSISPLHHPKQHEPHKIENL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttctaaacttaagtgaggatatggtcgagtgcccgctttgtatggaacctctg
gaaatggatgacctaaacttctttccatgtacttgtggctaccagatatgtcgtttctgt
tggcatcggatccgtacagatgagaatggtctttgccctgcctgtcggaaagcatatcct
gaaaatcctgcagacttcaagcctttatcgcatgaagagttgcagcgaataaaacaggaa
aagcgtcagaaggatgcacaacgtaaacaaaaggtgacagagaaccgtaagcacctagcc
aatgttcgggttgtgcagaaaaaccttgtctttgtggttggcctctcggcacggttagct
gatgcagagacattaaagaagcctgagtactttgggaaattcggaaaaatacataaagtc
gtaataaaccacagcacgagttacgctggatctcaggggcctagtgcatcagcatatgtg
acctatcagagagcggaggacgcgctgagagcgatccaggccgtaaacaacattcatgtt
gatgggcggactttgaaggcatccttggggaccaccaaatactgctcccatttcatgaag
aaccagccgtgtcctaagtccgagtgcatgtatcttcatgaattaggagatgaatctgcg
agttttactaaagaggaaatgcaacaaggaaaacatcaagaatttgaaaagaaacttcaa
gaacaatatttagggagtccaccatcggaaaaaaatagtaccactgtaccaccacctcag
ccagccacctcaggaaatccaagttccaataaacggacatcatctggagggggtaaagaa
aataatgctcccaaaagtcagcaggaatcaattactcccaatcctaatactggcgaggct
tggccatctctcaattccacagccaccaaagaaagtaaaaaatccaaaggcagcaaatca
gatagaagtaacggttcagcgagacatacaccaacagatgaacataataataataataac
aataataacaataataacataaatagtaaaagagggagtaaagagagggagagatcatgc
aatacaggcagcagcagcagtagtagcagtagtagcagcagcagtagcagtagctcaagt
ggaagcagtagcagctctagtaatggattgggtgtggatatgatgaaccacagtgttagt
ccagtggccacatcatcaccatcatcaggccatgagagttgcacgtcatctgcttccacg
accccacccccatcatttgatactcctctcattcctccttccccacccccttgttcttca
tctcctgtaccagtgtcatgtgtacaggatttatgtcaagaagaaacttcccccataccc
acaccaccttcttctttatcttcctcctccgaaccttcatcgtccttaccactaccacaa
cagttgtcacgttctgctgctgctgctgcatctctcttctctgacaacagcaacagtttc
ttctcatcggggccatcacttcctcttcagcgatcaacacctccacttccgccgtcatcc
tctcctcaacagaatcaccaacttcacaacagtcatgccagcagtcataagcacacacaa
catgatactacagcagattgggctaacaaaacatctgaagcatatgatatggacagtatg
tttccctctcagaatcactcgaatagtacgtggaattgtatatttgatttcgaaaagagt
gaagacatgacaagagttggttatttagttgatgatgaattaggttttgatccatttgaa
gagaccaacaaagcattagccgaagatataaaaattgaacaaaaacagcagcagcagctt
cagcggcatcaacaacagttcagtcatccccagcaccatcaacaccaaagtcagttacaa
ccacaacaccatcaacagcaacagcaacagcagcagttaagagctggcctaaaatcatta
atggactattcatctacgagtggacagtctcgtgccagattaccaccacctggttttaat
ggtttaaacagctttaattcctacagtatgccaagactaagtcaacctgaacccagtaaa
ctattaccaccattcttaagtggtttagcaggaaatcccaaccttggcacacctggactt
gggtccaccccttctgttcctccgtcattaaatggcttagtaggatccagtggtttaggt
gtacctcctggtttgagtggaagtctccttggtagcagtaacactagtggccttggtaat
ggtggtgtaccaggtggacttggtaatggcgtacccccacacctactttcaccagcttcc
cttttaagtatggacacacccctcagtgcctcacaaggtccgccaggtatagggttgcca
aaaggtgatgcgttcctccttaaagatttagaaaatggactccgtaatatatttcctgcc
atcagttcagttagcactatgaacacaatcaataccgttaacacgttaaactccctagct
ggaggagccaacaatccaacctcgcagaacaacccattaacaaacttcctaaacatggct
caccaacaccaacagcaccatcatcatcagcagcaccaacagcaacatccttcccagcag
tctcttctacaacaacttacgatgagctctctagcaaactcccacaaaggttggagcaac
agtggtgcccctgatcttacagtacttgatccagcaatagtgtcttcagggcagctgaca
gattcacgatcagattcccctccacactggatgaaaacaatggagcaactcacagaagga
ggcccccacccactttggaataacttggtgccatacggtttaacttcttctggcttgcca
actggtataaatccccactctgggtcatcgtgtcccacggctcccacacagcgctccgtg
gcacccatgtggccccaaacctctccgccaccaggtttcagctccatctccccactacat
catcctaagcagcatgaaccacacaaaattgagaatctctaa
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