Panulirus ornatus (ornate spiny lobster): 139760418
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Entry
139760418 CDS
T10834
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04137
Mitophagy - animal
porn04140
Autophagy - animal
porn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139760418
04137 Mitophagy - animal
139760418
04148 Efferocytosis
139760418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
porn03000
]
139760418
Transcription factors [BR:
porn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139760418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
PAS_3
PAS_11
PAS_9
PAS_4
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
139760418
NCBI-ProteinID:
XP_071539691
LinkDB
All DBs
Position
36:16996872..17854192
Genome browser
AA seq
1387 aa
AA seq
DB search
MPIAHYPYTPTGVHPGFYSSDCCPGPPADALSRRPQPSLHTGPSFTGTHSWCSPAGGPGS
DGGHMSGASHGSAPHPGYHGAGDPVAAAHNSGQIPSPDNGVPLPRPHVGGPVPYSNSGDP
GEPGSHNGDQVARPHNMGPYPGPSGRGLEPQGQLGRLVSGGYPTGGVVSNDGRHMMYPPL
PMMDHRGLPYPDPRRHSYAAMQQYPSFATTMDAGPAAYEQGMYRPPAAMQLCQVYPDCRV
NGSYGSYIQQPVRGGGEQQQQPQVSPECGHPQVGQNSLPVTTKVEPDAEQWSDGDLLERV
EQVPPQTEEAPTLVCREYTKPRRRRRNSEKRKEKSRDAARCRRGKESEIFTELASALPLP
HQTITQLDKASVMRLTLAFLKTRALCQAGFSKCVEGGSTKLDVEKNELFLKALDGFVLVL
SIEGDIVYTSENIVNFLGLPQVDVMGQSLYDYTHPCDHEEVRELMTNKGPQEPRHAFLRL
KCTLTAKGRSVNLKSASYKVVQVSGELVGREEEQSWLVALGTPVPHPSNIEFPLDKQTFV
SKHSLDMKFTYVDDNVGDFCGYSAEELVGHSLYEMHHALDSDLVKDAYKTLRNKGQVETG
RYRFLARDGGYVWLVTQATLIHGPKDHKPQYVVCLNYVVSGVESSGEILSELQLICSTNS
PASSKVSSKSSSVTVAAPPVVKSIATPKVPLAKSSNQPKVEEVTSSVGVRLPSAPPPRPP
VAATSKVFAPRTEDMNKGYLMFPNGDPQCTVLKEEPEDLTHLAPSGGDTCVPLLDVPTLI
HDLNEDTCIPQDVSKFIPNLDEIFTLDYPITSSDVLISSPVPDNTEEQENSQDYFYDENK
LKDGVKCMNSLSGGKIVINKSGCNASPSYCSTVRPSGQGTPEPPKPLLSQAALPSVRERK
QNTFAFGSSRPRTTTESLFMQLDESRTTGSTAEVFGKLDLKLDQNMDTDDLEYRAPFIPL
SNEVLMLSPDDLLWGAESEPVLSPKHHASSSRYEKCSNVIDKEDSSLAQLLRDTDPPITG
IGPGRNLRPENSTSTQGTQYQQSKFLDGGGNFVDPNKVLPGHSGGKEDLDCTSASALLVD
PPPVMVQETVEPPPPLLTHDSHPVSLPVKRVHSPNSSPILNHKKLCSPSCQLQQKHNSQV
QDGLMQQPTSGVRLLATPYAPTMQQLLVSKEPITVRGGRPGGGIGVVRSSVADKGHSVLR
NLLVSGRDDTAGYSVSAPTSPAGTPSRSAATSPGPPLLSDEAKGGKDVHSDGSLVIGEPQ
PGGSGLTSTSVYLPRDKVTPKLLTGCGGKIAEGHLPYPKLRLVTGSQNALMQAGHLAFKL
ASNPNGLSGEGSVKLTRRQDPLLLMDPDTTIPNLLDLTQLDYEVNAPANNNNLLHGPELV
MALDQGL
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagcgcactacccctacaccccaaccggcgtccatcctggcttctacagcagc
gattgctgtccaggaccccccgcagatgccctcagtaggaggccccagccttccctacac
acagggccctccttcacgggaacccacagctggtgttcccctgcaggaggacccggtagc
gatggtggtcatatgtcaggggcctcacatgggtcggctcctcatcctggctaccacggc
gcaggtgacccggtagctgctgcccacaactctggccagattccatcgcccgataatggg
gtccctctgccacgcccccacgtcgggggcccggttccttactccaacagtggggacccg
ggggaaccgggttcccataatggggaccaagtggcacggccccacaacatggggccatac
ccaggccccagtggccgaggcctggagccacagggtcagctcgggaggctagtgtctggg
ggctacccgacgggtggagtcgtgagcaacgacgggagacacatgatgtacccaccactg
cccatgatggatcaccgggggcttccctaccccgacccccgcagacacagctacgcagcc
atgcagcaatacccatccttcgccaccaccatggacgcaggaccggctgcgtacgagcag
ggcatgtaccgcccgcctgccgccatgcagctctgccaggtctatcctgactgtcgggtt
aatggtagttatggtagctacatccagcagcctgttagaggtggaggagagcagcagcag
cagccccaggtctccccggagtgtggacacccccaggtgggacagaacagcctccctgtc
acaaccaaagttgagccagacgccgagcagtggagcgatggagacctgctggagcgcgtg
gagcaggtgcctccccagacggaggaggcgccgacgctggtgtgccgggagtacacgaag
ccacgacgcagaagaaggaacagcgagaagaggaaggagaagtcccgggacgcggcgcga
tgtcgtcgtgggaaagagagcgagatcttcactgagctggccagcgccctgccgctccca
caccagaccatcacccagctggacaaggcgtcagtcatgcgcctcaccctcgccttcctc
aagacacgcgccctctgccaggctggtttctcgaagtgtgtggagggcggaagcacaaag
ctggacgtggagaagaacgagttattcctgaaggctcttgatggcttcgtcctggtcctc
tccatcgaaggtgacattgtatacacctccgagaacatcgttaacttcctgggccttccc
caggtggacgtgatggggcagtcgctgtacgactacacccacccgtgtgatcatgaggag
gtgagggaactgatgaccaacaagggcccgcaggagccgcgccacgccttcctcaggctc
aagtgcaccctgaccgccaagggccgctccgtcaacctgaagagcgcctcctacaaggtg
gtgcaggtgagcggtgagcttgtgggtcgtgaggaggagcagtcgtggctggtggcactg
ggcacgcctgtgcctcatccctcaaacattgagttcccgctggacaaacagaccttcgtc
agcaaacattccctggacatgaagttcacatacgtggatgacaatgttggggatttctgt
gggtacagcgctgaggagctggtgggtcactcgctgtacgagatgcaccacgctctggac
tccgacctggtcaaggacgcctacaagacactgaggaacaagggtcaggtcgagacgggt
cgctataggttcctggcccgggacggtggctacgtctggcttgtgacacaagccacactc
atccatggacccaaggatcacaagccacaatacgtcgtctgcctcaactacgtcgtcagt
ggtgttgagtctagtggtgagatactatcagagttgcagttgatatgcagtactaacagt
cctgctagtagtaaggtatccagcaaatcttcttcagtcacagttgctgctccccctgtt
gtcaagagcattgccactccaaaagtacccttggctaagtcaagcaaccaaccaaaagtt
gaagaggtaacaagcagtgtaggtgtacgtcttccttcagctcccccaccacgtcctcct
gttgctgccacatccaaggtctttgcccctcgtacagaggatatgaataagggatatctc
atgttcccaaatggtgatccacagtgcacagtgttgaaagaggagcctgaggacttaacc
cacttagcaccttcaggtggtgacacatgtgtgcccctcttggatgtacccaccctgatt
catgacctgaatgaagacacgtgtattcctcaggatgtttccaaattcatccccaacctg
gacgaaatcttcactcttgactatcccatcactagttcagatgtactgatttcaagccca
gttcctgataatactgaagagcaagaaaatagtcaagattatttttatgatgaaaataaa
ctgaaagatggggttaagtgcatgaacagtttaagtggagggaagatagtgataaataag
agtggttgcaacgcctccccatcatactgtagcactgtacgtccgagtggacaaggtact
cctgagccgcctaaaccactactcagtcaggctgcattaccatcagtccgagaaagaaaa
caaaatacgtttgcatttggtagcagccgtccaagaacaacgaccgagtctctcttcatg
cagctggatgagagccgcacaactgggtcaacagcagaggtctttggcaaattggatctc
aaacttgaccaaaacatggacactgatgatcttgagtacagagctccgttcattcctctc
agtaatgaggtgctgatgcttagtccagatgatctcttatggggagcagaatctgagcca
gttttgtcccctaaacaccatgcatcatccagtcggtatgaaaaatgttctaatgtcatt
gataaagaggactccagcttggctcagctactgcgggacactgaccctcccatcactggc
attggcccgggaaggaacttgcgaccagaaaactccacaagtactcaagggactcagtat
cagcaaagcaaatttcttgatggtggtgggaattttgtagacccaaacaaagtactgcca
ggacattcaggaggtaaagaggacctggattgtacatcagccagtgcactattagttgat
cctcctcctgtgatggtgcaagagacagttgaaccaccacctccattactgactcatgat
tcccaccctgtatcactgccagtcaaacgagttcattcaccgaattcatcccccatcctt
aatcacaaaaagttgtgttccccgtcttgtcagttacaacagaaacataattcacaagta
caagatggattgatgcagcaacctaccagtggtgtgcgtctcttagccacaccatacgcc
cctacaatgcaacagttgttagttagcaaggagccaatcactgttcgaggtggacgtcct
ggtggaggtattggagtcgtccggagttctgttgcagacaagggtcattctgtgctccgt
aatctgttggtgagtggacgtgacgacactgctggctactctgtgtcagctccaacaagt
ccggctggcacgccttctagaagcgccgccacatccccaggcccacccctgttgagtgat
gaggccaaggggggaaaggatgtacacagtgatggcagtttagtcatcggagagccccaa
ccagggggtagtggccttacttctacgtcagtttacctgccgagggacaaggtgacacct
aagttgttgactggatgtggggggaaaattgctgagggtcatttgccataccccaaactg
agattagtgactggaagtcaaaatgccttaatgcaagctggccatcttgcatttaaactg
gcatccaatccaaatggactttcaggagagggttcagtcaagctgactcgacggcaagac
ccacttctgctgatggatcctgatactacaattcctaacctgttggacctaacacagctg
gactatgaggttaatgctccagcaaacaataacaacctactgcatggaccagaattggtt
atggcactagatcagggcctttaa
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