Panulirus ornatus (ornate spiny lobster): 139760791
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Entry
139760791 CDS
T10834
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139760791 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139760791 (Usp39)
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139760791 (Usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139760791
NCBI-ProteinID:
XP_071540494
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Position
38:complement(2413428..2445143)
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AA seq
501 aa
AA seq
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MITPDINSTTNTTMKVKRELEDDPGDRRVTKKSRSCPYLDTINRHMLDFDFEKLCSVSLS
RINVYACLVCGKYFQGRGPNTHAYTHSVSDGHHVYLNMQTLRFYCLPDNYEIIDSSLNDI
IFVVNPTFSRDYIAHKVNQSKMSRAYDGTLYLPGIVGLNNIKANDYCNVVLQALSNITPL
RNYFLDPCNYSHIHHAPGTQGLAMFPLITRFGELVRKLWNPRNFKAHVSPHEMLQAVVSC
SKKKFQFTVQGDAIQFLSWILNAMHLGLKTPKRKNTIINRCFRGTMNIYSEKILPVDIDD
KERDRLLKSEEYQEKMEESPFLYLTCDLPQPPLFKDEKKENIIPQVSLYVLLSKFDGKTG
KEYQTYKENILKRFQLTGLPPYLILYHKRFTKNTFYVEKNPTIVNFPVKNIDVSEYLTEE
VKQKHSEPIYDLVANIVHDGEPSTGTYRCHILHKGTGKWYELQDLHVKEIEPQMLTLTES
YVQIFEMQNCFVRSQDGKKNF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattacgccggatataaattcaacgacaaatactacgatgaaagttaaaagagaactt
gaagatgatcctggtgacagaagagtcacaaaaaagtctcgctcctgcccatatctggac
accattaatcgtcatatgcttgattttgactttgaaaaactatgcagtgtatcactctcc
agaatcaatgtctatgcctgcctggtttgtggtaaatactttcaaggtcgaggacctaat
acccatgcatacacccacagtgtatctgatggtcatcatgtgtacctcaatatgcagaca
ctcaggttctactgtctccctgataactatgagattattgattcttccctgaatgatatc
atctttgtggtaaatccaaccttctcacgagattatatcgcccataaggtgaaccagagc
aaaatgagtagagcttatgatgggacattatacttgccaggcatagttggtcttaacaat
atcaaggccaatgactactgcaatgttgtcttacaggctttgtcaaatatcactccatta
cgtaactatttcctggacccctgcaattacagccatattcaccatgcacctggcacccaa
gggttagcaatgttcccactcattacgagatttggagaactagtgcgtaaattatggaat
ccaaggaatttcaaggctcatgtatcacctcatgaaatgcttcaggcagtagtatcatgc
agtaagaagaaattccagttcacagttcagggagatgccatccaatttttgtcatggata
ttaaatgcaatgcatttaggactgaagacaccaaaaaggaaaaataccatcatcaatcgc
tgcttccgaggaaccatgaatatctactctgaaaagatcttgcctgtggatatagatgat
aaggaacgagatcgactgttaaagtctgaagaatatcaagagaagatggaagagagccca
tttctgtatcttacctgtgacttgccacagccccctttatttaaagatgaaaagaaagaa
aatatcattccacaggtgagcttgtatgtactgctgagtaagtttgatgggaagactggg
aaggaataccagacctacaaggagaatattctcaagaggttccaactcacaggacttcct
ccatatcttatcctgtaccataaaaggtttaccaagaacacattctacgttgagaagaac
ccaacaatcgttaattttccagtgaaaaatattgatgtttcagagtatttgactgaagag
gtgaagcagaaacacagtgaacccatatatgacttggttgccaatattgtgcatgatgga
gaacccagtaccggcacatatcggtgccacattctgcataagggaacagggaagtggtat
gaactgcaagatttgcatgtcaaagagatagagccacagatgttgactcttactgaatca
tatgtgcagatattcgaaatgcagaactgttttgtaagatcacaagatggcaagaagaac
ttttga
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