Panulirus ornatus (ornate spiny lobster): 139761310
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Entry
139761310 CDS
T10834
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139761310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139761310
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139761310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_11
TPR_8
TPR_16
TPR_12
TPR_7
ANAPC3
ARM_TT21_C
TPR_6
TPR_9
TPR_15
ARM_TT21
TPR_10
DUF5588
Motif
Other DBs
NCBI-GeneID:
139761310
NCBI-ProteinID:
XP_071541463
LinkDB
All DBs
Position
40:3159692..3224294
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AA seq
1339 aa
AA seq
DB search
MAEVKAALKEAKKAMKENDFEAVSKFCKVALKHDRKNYNALLLFGRACQELGKLEDSKKA
LMMATQVDPESPVAWQGLAVLCDKKPDITTRDEAITIYTRLTGIIKNDDEKVDSVYRKLA
MLQLEKEEPVVAAATLRILVDRLTDQNKVMDAWRSIAQTLSGVKDLPDEDTSKLQEALEH
ILNDSVLGDNEGNYHTYLQLLYRTKQMAKLVTAAETMSNIFYSSYPLEWICRVYVEMTAD
PKDGDEEFPLDEDEMYEYVTKLLSLNKASPWGNLAQGIIYQREDKFVEAKAHLRVGAERV
RNNLLGWKLLLTVQEASNDWAGVEVTCSKALIILSADQHISIPGNEEFESYQTRLRLTRA
KAFVHMGHKNHLRQAVAILEKHAETSLDCGLLLVRSRIKLQEFDMAADDLENLHDAFGEQ
FQFKLLSATLHRARGERQKAQQLLEEFVQEQPGYAEGHMELGRVYYEKRDLKKAQICCMR
AGKLDPKLGQAFLYLGHFFRYDNNMEKALKCYEKALSLSPNDDDIGAALSDLYRILGKYE
ENIKLLHRITNEGGRSSCGWAWLRLGLHHLVLQNYDQAIQAFQCTITINPDDSASYECLG
DAYLARGAHSAALKVFTYASQLNPGALYPLYQIAHIKQIVGENLEAIKDYEAVLKREPIE
PVQVVSLIGLAEALLASARKYREQSFFSNLKDACLSAITFLMKAAKLKPETSCIWKLMGD
ACTLLYPMPTSLASFSIPAKLIDREIEDLEELVEVDKLQVLQMGARCYGLALQISKDDGA
LWYDLGVNTYHQGMILERSTTEGNEANTRNLMERSLMALRKSLTLDPANGKTWNSLGIVA
SHKMVGEYALAQHALIKSCECQPNAVVWSHLGAFYLVQGEIHLAHEAFSQAQSLDPLFVT
CWVGQALVAESVGHIEAYDLFRHTTLLGIQVESCMGYAHHVTQLACDPSKQNSQWTQQAI
RQALPTATDSLVFYTREKEEDVVALNMAGLTLEMMGLYQSAARAYKMALYSLKEDQPEKL
EILDGVRCNLGRTYTAQGKVEEAMLQYKSIKNPDYFTQCGLALASLKAGKFEDAYNSYTA
ALHWLAPDDTQKSHILVALASLQYKFQNQAEAKKLLFQGSQLRGASVHGLLALAAMGLIS
DDAVLTSAALAELAPHEHNEEHLHHVAFLKAAEATARGNTKEAKLILSRCIHQHPSSAPL
WRSLARHLLTTTSACRKVTNQCAAAATCAAAATKLAQVAGIQKTIAKDTVTSVMATLGLE
TSTQRNPTNKTGLRQAQRAVLMCPGSPEAWAMLIAAQVVTGQSQNKMQIGQVARIWSQKE
SSRVTSWLQKVSTDLVQAA
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcaaagctgccttgaaagaggctaagaaggctatgaaagaaaatgacttt
gaagcagttagcaagttctgcaaggttgccctcaagcatgaccgtaaaaattacaatgcc
cttttgttatttggccgtgcctgccaagagcttgggaagttggaagactcgaaaaaagct
ctcatgatggcgactcaagtagacccagaaagtcctgtggcttggcaaggacttgcagta
ctttgtgataaaaagccagatatcaccactcgagatgaggctatcactatttatactaga
cttacaggcattataaaaaatgatgatgagaaggtagatagtgtatatcggaaattggcc
atgctacagttagaaaaggaagagcctgtagttgctgctgctacattgcgaatacttgta
gacagactgacagatcagaacaaagttatggatgcttggcgaagtattgctcagaccctc
tcaggagttaaggacttaccagatgaagacacatcaaagctacaagaggctttggagcac
atccttaatgattctgttttgggagacaatgaaggcaactaccatacgtatctacagctc
ttgtaccgtacaaaacagatggctaagcttgtgacagcagcagagacaatgtcaaatatt
ttctattcaagttacccattggaatggatttgcagagtgtatgtagaaatgactgcagat
cccaaggatggagatgaagaattcccactggacgaagatgagatgtatgaatatgtaact
aaactcttaagcctcaataaggcatctccatggggtaatcttgcccaagggattatttac
caacgtgaagacaaatttgtcgaggcaaaggcacacttaagagttggtgctgagcgagtc
aggaataacttgcttggatggaaattgcttcttactgttcaggaagcaagtaatgattgg
gctggtgttgaagtaacttgcagtaaggcactcataattttgtctgctgatcaacatatt
tcaatacctgggaatgaggaatttgagtcttatcaaacaaggttgaggttaactcgagcc
aaggcatttgtacacatgggacacaaaaatcacctccgacaggcagttgcaatacttgag
aaacatgcagagacaagtttagattgtggactcctgttagtcaggtcaagaataaaattg
caagaatttgacatggcagcagatgatcttgagaatctgcatgatgcctttggagagcag
ttccaatttaagcttctttcagcgacacttcatagggctcgaggagaaagacaaaaagct
caacagcttttagaggaatttgttcaggagcagcctggttatgctgaaggccacatggag
ttaggacgagtatattatgaaaagagagacctaaagaaagctcagatatgttgtatgagg
gctggaaagctggacccaaagcttggacaagcatttttatacttaggacatttcttccga
tatgacaacaatatggaaaaagcactaaaatgctatgagaaagcattatccctaagtccg
aatgatgatgacattggagcagcattgtcggatctgtacagaattcttgggaaatatgag
gaaaacattaaattgttgcatcgcataacaaatgaaggaggccgttcatcctgtggctgg
gcatggcttcggcttggtctccaccatcttgtactccagaattatgaccaggctatacaa
gcctttcagtgcactatcaccataaaccctgacgatagtgctagttacgagtgtcttgga
gacgcttatctggctcgtggtgctcacagtgcagctcttaaggtgtttacttatgcatct
cagctcaatccaggggctctttatcctctataccagattgctcatattaagcagatagtt
ggtgaaaacctagaggcaataaaagactatgaagctgtgttgaagcgagagccaattgaa
cctgtgcaagttgtgtccctaattgggctggcagaagctctcttagccagtgctcgaaag
tatcgtgagcagtctttcttctcaaacttaaaggatgcatgtctcagtgccatcactttt
ttgatgaaggctgccaaattgaaacctgaaacttcatgtatctggaagttgatgggtgat
gcgtgcacactgctttatcctatgccaacttcccttgcaagtttcagtatccctgccaaa
cttattgatagagaaattgaagatttagaagaactagttgaggttgataaacttcaagta
ctgcagatgggtgccagatgttatggcttggctcttcaaataagtaaagatgatggagca
ctttggtatgatttaggagtgaatacatatcatcagggcatgatcttagagagaagcaca
acggaggggaatgaggctaataccagaaacctgatggagcgttctctcatggcattaaga
aagagcctcacattggatcctgcaaatgggaaaacttggaactcacttggcattgtagct
tctcataaaatggttggtgagtatgcattagcccagcatgctctaatcaaatcctgcgag
tgccagccaaatgcggttgtatggtctcaccttggggcattctacttggttcagggcgag
attcatcttgctcacgaagcgttctctcaagctcagtctttggatcctttgtttgttaca
tgctgggttggacaggctcttgttgctgagagtgtgggccacattgaagcatacgatctt
ttccgtcatacaactttacttggtattcaagttgagagttgcatggggtatgcccaccat
gtaacccagttagcttgtgatcctagcaaacagaatagccagtggactcagcaggccatc
agacaggcactgccaactgcaactgactctttggtattttatactcgggaaaaggaggag
gatgttgtggcgctgaacatggctggcttaactctggagatgatgggactgtaccagtca
gcagccagagcttacaaaatggcactatattctcttaaagaagatcagcctgaaaaattg
gagattctagatggggtccgctgcaaccttggtagaacgtatactgcccaaggaaaggtt
gaggaggctatgttgcagtataagtccatcaaaaatccagattactttactcagtgtggt
cttgctcttgcaagtttgaaagcgggaaagtttgaggatgcttacaacagctatactgct
gcccttcactggttggctcctgatgatacccagaaatcacacatacttgttgctttggca
tccttacagtacaagttccagaaccaagctgaagctaaaaagttgctgttccaagggtcg
cagctgagaggtgcctcggtacatggactcttggcacttgcagccatgggcctaatttct
gatgatgctgtgctcaccagtgctgctttggcagagcttgctccacatgaacataatgaa
gaacacctccaccatgtggcttttttgaaagctgcagaagccactgcgaggggaaacaca
aaagaggcaaagttaatcttaagtcgctgcatacatcagcatccgtcaagtgctccattg
tggcgctcactagctcgtcatctccttaccacaacatcggcatgcagaaaagttactaat
cagtgtgcagctgctgctacttgcgctgctgcagcaaccaaacttgcccaagtagcagga
attcagaaaactattgctaaggatactgtaacaagtgtaatggctaccttggggttggaa
acaagcacgcagagaaaccccactaacaagactggtctgagacaagctcagcgtgcagtt
ctcatgtgtcctggatccccagaggcttgggcaatgcttattgcagcccaagtagtcaca
ggacaatctcagaataaaatgcaaattggtcaagtggcaagaatttggtcccagaaggaa
tcttctcgagtgacttcatggctgcagaaagtatcaactgatctagtacaagcagcttag
DBGET
integrated database retrieval system
