Panulirus ornatus (ornate spiny lobster): 139761399
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Entry
139761399 CDS
T10834
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03440
Homologous recombination
porn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139761399
03460 Fanconi anemia pathway
139761399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porn03400
]
139761399
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139761399
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
139761399
FA (Fanconi anemia) pathway
Downstream FA components
139761399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
139761399
NCBI-ProteinID:
XP_071541645
LinkDB
All DBs
Position
3:24316828..26285399
Genome browser
AA seq
1340 aa
AA seq
DB search
MSSENQQQQNVYTIGGVKVQFPAKPYPSQMAMMAQIMKGLQRRQNCLLESPTGSGKSLAL
LCSTLAWQDTEKEKAQRYNGLISQGITDPDTLARAIGQANLLGTSGVDLPPEGSQVPPPT
QDVPLTPAPPSTSVPATTPAAAAAAAAAAAAAAAAAATGGGFIPEDDDDDFRTPDQRFRD
DVEADASQEPPADTQENVDSEVRPPWETAEEARRPKMMRVPTIFFGTRTHKQIYQIIKEL
RRTAYKHVRSVVLASREHTCIHPRVSKLRNKNEECRNLVDPRKGSWCKFYHGVSKIKTHA
DLAHFGFDTVWDIEDLVTLGKGIQACPYFAARSLMTTAEIVICPYNYLIDPLIRESMDIH
LNGNVIVIDEAHNIEDSAREASSFTLTQDEILEARQDIEKLAVLEMDEHACTELIRMLNA
LNGWVDLNSDKLTDYLEFNRSSKIFTGTEMIATLDHLGIGPNSFPEFQRCLDTLTEDTDP
EELKPRLNSTTTAMLKNLFLIYDFLIMDDMKYRDDYRIALIRVQARKNAVPNASGWISRG
RSTVGWEYSINFWCLNPAVAFRYLCSGVRSIILTSGTLSPMNSFQSELAIPFKIQLEANH
VIEKNQVWVGTIGKGPTEQTLKATYRNTENWGFQDELGRLVLSVCRAVPRGILCFLPSYA
MLNKLLDRWQNTGMWEELSHIKVPMTEPRNGEEFEETMALFYDTIRNTRSESDGGINGAF
FMAVCRGKVSEGLDFTDDNARAVIAVGIPFPSIKDIQVDLKRQYNNTHSRSRGLLSGGDW
YEIQAFRAINQALGRCIRHRFDWGAIILVDERYQQGCLSNGMQQNKYTRSLSKWVRNKIV
HHLNFSMALSDLCQFVESMKANPPVKPYSLNETGVSSKTLHTLKPDETSSYDSVSFGSSL
NPNQTNESLNLTLVDPESELTTRNTLFINSVSQNSFEDCSKNVENFTSQENYGSCIDEFN
TSVIGGLHARHSNDSDINEGDLVIPSGGFPFTSTQATSSRNAFPSEMSDTNTFSKQRNIS
NGYFVSAPTLCKVDDTQNGYNSQVVMKAVPDTVHHLAKSTESLLLNVEESKTGESEDKDE
KIDGTLGSCVEEFYKFRYIDVSSKSSVSPLKVLLEKEINEKTSQNSTPESNGKGKRSHDN
VLEISLPRKSLKFDATYPDDSQIKDEASVYHKETCSPQLFNSVDDHYQGDAHVEYVNKLL
TKDEKSPVMKNEYRKPHKLKVNNATLSQDIQCSSDSAVVTPEGRLGCKSESERSIKSCSC
ADSHYGKESSECCNTVGRTPSFTKRLLDVKPLVFFDDSDLDDFDLDQSFNKPGEKTICRI
SRGKKTASKHKGVQYSEYTE
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgaaaatcagcagcagcaaaatgtttacactattgggggcgtcaaagtgcag
ttccctgccaagccttatccatcccagatggctatgatggcacagattatgaagggactg
cagcgacgtcagaattgtttgttagagtccccaacaggctcaggaaaatctttagcgctc
ctatgttcaacattggcatggcaagacacagaaaaagagaaggcgcagcgatacaacggc
ctcataagtcaaggcattactgacccagataccttagccagggcaataggacaggccaac
ttgcttggcacttctggtgtcgacctaccccctgaaggctcccaggtacccccaccaacc
caggacgtccctctcacccctgccccaccctctacgtccgttcccgctactacacctgct
gctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctactgggggt
ggcttcattcccgaagacgacgacgacgacttccgaacccctgaccagcgtttcagggat
gacgttgaggcggacgcttcccaggagcccccggcggacacccaggagaacgttgactcg
gaggttcggccgccctgggagaccgcggaggaggctaggcggcccaagatgatgagagtg
ccaaccatcttcttcggcacgagaacacacaagcagatctaccaaatcataaaggagcta
cgacgcaccgcctacaagcacgtcaggtcggtggtattggcgtcgcgggaacacacctgt
atccatccccgagtcagcaaattacgcaacaagaatgaggaatgccgtaatctggtggac
ccacgaaagggcagttggtgtaaattctaccatggcgtcagcaagatcaagacccatgct
gaccttgcacattttggctttgatactgtatgggacattgaggacctggttacactgggc
aaggggatccaggcatgtccatactttgctgccaggtcacttatgactactgctgagatt
gtgatatgcccttataactaccttattgatcccctcattcgagagtcgatggacatccac
ctgaatggcaatgtaatagtaattgatgaggcccacaacattgaagacagtgccagagag
gcatcttcattcacacttactcaggatgagatacttgaggcccgacaagatattgaaaaa
ttggcagtattagaaatggatgaacatgcttgtactgagctgatccgtatgttgaatgct
ctaaatggatgggtggatttgaactcggacaagctcacagattatttagagtttaatcgt
tcaagtaagattttcactggcacagagatgatagcaacactagatcacctgggtattggc
cccaatagctttcctgaattccagagatgcctagatacactaacagaggacacagaccct
gaagagttgaagccccgactcaacagtacaacaactgcaatgctcaagaaccttttcctc
atttatgatttcctcattatggatgacatgaagtaccgggatgattaccgaattgcgtta
ataagagtgcaggcaagaaaaaatgctgtaccgaatgcaagtggctggattagcagaggt
agatcaactgtaggatgggagtattccattaatttctggtgtctcaaccctgctgtggct
ttccgttatctttgttctggtgtccgctcaatcatcttgacatcaggaactctttccccc
atgaattccttccagtctgagttggctattccattcaagattcagctagaagctaatcat
gtcattgaaaagaatcaggtctgggttggcacaataggtaagggaccaacagaacagacg
ctaaaggcaacatacaggaacactgaaaactggggattccaagatgagcttgggaggcta
gttctaagtgtgtgtagggcagtacctcgagggatattatgtttccttccatcctatgcc
atgctgaacaaactgcttgatagatggcagaacacagggatgtgggaggaattaagccat
ataaaggtacccatgacagaacctcgaaatggtgaagagtttgaggaaactatggcactc
ttttatgacacaatcagaaatactaggtcggagagtgatggaggtataaatggggccttc
ttcatggcagtgtgccgtggaaaagtcagtgaaggactggatttcactgatgataatgct
cgagctgttatagccgttggcataccttttccaagtataaaggacatccaagttgatctg
aaacgtcagtacaacaatacacattctcgttcccgtggccttctttctggaggtgactgg
tatgaaatccaggcgtttcgagccataaatcaagcacttggacgatgcattcgacatcgt
tttgactggggtgctattatattggttgatgagcgttaccagcaaggctgtttatcaaat
ggaatgcagcaaaataagtacactcgcagcctttcaaagtgggtacgaaataagattgtt
catcacttgaatttctctatggcattgtctgatctgtgccagtttgtagaaagcatgaag
gcaaatcctccagtgaaaccatacagcttaaatgaaactggggtctcctcaaaaacattg
catactctgaaacctgatgaaacaagttcatatgactctgtgagttttggtagttcccta
aatcctaatcaaacaaatgaatctttaaacttgactttagttgatccagagtcagagctg
actaccagaaatactcttttcattaattctgtatctcaaaattcatttgaagattgcagc
aaaaatgttgagaatttcacctcacaagaaaattatggttcatgcatagatgaatttaat
actagtgtaataggtggtctacatgctcgccactctaatgactcagacattaatgaagga
gaccttgtaattccatcaggtgggtttcctttcacttcaactcaggcaacaagctcaaga
aatgctttcccttctgaaatgtctgataccaacacatttagcaaacagagaaatataagt
aatggttattttgttagtgccccaactctttgtaaagttgatgatactcagaatggttat
aactctcaggttgtgatgaaagcagtacctgacacagtgcatcatctagcaaaaagtaca
gaatcccttttattaaatgtggaagaatcaaaaacaggtgaaagtgaagacaaagatgag
aaaattgatggaactttaggatcttgtgttgaagaattttataagttcagatatattgac
gtcagttctaaatctagtgtatcgcctcttaaagttttattagagaaagagataaatgag
aaaacttctcaaaatagtactccagaaagtaatggaaaggggaaaaggagccatgataat
gttttagaaatatcgttaccaaggaaaagcttaaaatttgatgccacatatcctgatgat
tcacagattaaagatgaggcatctgtgtatcataaagaaacctgttctccacagcttttt
aattcagttgatgaccattatcagggtgatgctcatgttgagtatgtgaataaactttta
acaaaagatgaaaaaagtcctgtgatgaaaaatgaatataggaaaccacacaaactgaag
gtaaataatgcaacacttagtcaggatatacagtgctcttcagattctgcagttgttaca
cctgaaggaaggcttggttgtaaatcagagtcagagagatcaataaagtcttgcagctgt
gctgacagtcactatggcaaggaaagttcagagtgttgtaacacagtaggcagaacacca
tcatttacgaaaaggctgttggatgtcaagcctttggtattttttgacgattcagatttg
gatgacttcgatttggatcagagtttcaacaagcctggagagaaaactatctgccgaata
tctcgaggtaagaagacagcttcaaagcacaaaggtgtgcagtattctgaatatactgag
taa
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