Panulirus ornatus (ornate spiny lobster): 139761406
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Entry
139761406 CDS
T10834
Symbol
Rrp46
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139761406 (Rrp46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139761406 (Rrp46)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139761406 (Rrp46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
GcvP2_C
Motif
Other DBs
NCBI-GeneID:
139761406
NCBI-ProteinID:
XP_071541652
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All DBs
Position
40:complement(11750270..11755848)
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AA seq
210 aa
AA seq
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MSKHACELNFLSRSDGSALYSVGNTVALASVNGPGDVKKSNRQYNRSHLEVCYSPSTGQS
MIAERALESVITHTVEQVILVHLHPRTAVYITIQEMQSDGLALSTSVNAACMALLDAGVQ
MKSTFAAVTCCVTSXGTILIEPTEAEMKESVAVATFVFDGQALNVLSAHQEGCLNADNFN
ACLKKCQTAAKDIFHFYRRILEEKCNSESI
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacatgcctgcgaactaaatttcctgtcccgctctgatggatctgcactgtat
tcagtagggaatacagtggcacttgcatcagtgaatgggccaggtgatgttaagaagtcc
aatcgtcagtacaataggtcgcaccttgaggtctgctacagccctagcacgggccagtcc
atgatagcagagagagcattggaatcagtgatcacacacacagttgaacaagtgattctt
gtacatctccaccccagaactgccgtgtatatcactatacaagagatgcagtctgatgga
ttggcactctcaactagtgtgaatgctgcatgcatggctctgcttgatgctggagtacag
atgaaatcaacttttgcagcggtcacatgctgtgttacttctngagggaccattttaatt
gagcccacagaagccgagatgaaggaaagtgtggcagtggcaacatttgtatttgatggt
caagcattgaatgttttgtcggcacatcaggaaggatgtctcaatgcagataattttaat
gcttgtttgaagaaatgtcaaactgcagccaaggatatttttcatttctacaggaggatt
ttagaggaaaagtgtaatagtgagagtatttga
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