Panulirus ornatus (ornate spiny lobster): 139761739
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Entry
139761739 CDS
T10834
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139761739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
porn00536
]
139761739
Glycosaminoglycan binding proteins [BR:
porn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139761739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
139761739
NCBI-ProteinID:
XP_071542245
LinkDB
All DBs
Position
41:complement(18820046..18887986)
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AA seq
1730 aa
AA seq
DB search
MDRAQRLRLILHGLIWAWIYRHAAAAGGSLLEAVGVAEQPLGVVETRGMCDERPGEDGQP
DVAYKVTEQAVLTVPTANLFPLRFPEDFSIMATLRPEQGSNSVLFGLYSDTGEDQLLAEV
GDTIKLFYQDEKGSPDGNTTLEFGAAINDGKWHRLGLSVKGNSVTLLVDCETTSNILLPR
DSPSHISNAGIILLGQQLLEEKYFAGDIQQLDIVSGPEAAYDHCHTYMPDCDVELPKSPL
VSPTHLAYVTGGDDQTAYTDASDPFVADNVTTTVSTNRGRKGRRGQRTGGLDVDAAAFSP
SYPTGVLRGYPGPPGPPGPLGPKGDPGRDGIPGTDGLSGPPGHVFMIPLNLQGNEKGPDQ
MLEQFQQQLSQHMLAMRGSAGPMGLTGLPGPEGPPGDPGLKGEPGDMGEPGPRGMRGNMG
TTGQRGRRGRPGRDGERGLSGIPGSKGEAGLRGLPGMPGEKGHRGPVGLSGEPGLPGHEG
MPGEPGSPGVTGLPGEMGPRGFIGPRGFPGLPGPPGIPGSEGTNGPEGDSGPPGQPGPPG
QSGPSGPIGPPGPQGLLGPPGPSGPRGKPGLPGLVGADGLPGHPGNPGIIGPKGDKGPVG
PSGSMGFPGPRGVKGDQGNRGFQGEKGNKGDRGLDGPKGDMGLKGGRGEVGPEGQIGLEG
PEGPKGFEGPRGETGPPGSSGEKGKLGVPGFPGYPGPPGDKGDKGSPGLQGRPGDKGERG
NSGLPGERGEQGPRGFRGSRGRRGKTGLSGPKGDTGQPGPPGSSGEQGPQGPEGPTGFAG
PPGPPGVDGKDGIVGPPGERGPPGEQGNQGSKGPPGVVGPVGPAGESGAAGEPGPPGAPG
VPGEEGRPGEAGKEGPPGTMGRPGKNGPVGPPGLPGFPGERGLSGIPGAAGLKGESGPPG
PAGAPGDKGAMGTAGEAGPQGPTGKVGPPGPRGSSGAKGERGDQGVPGPTGRDGLLGPRG
LPGPPGPVGEPGEDGDKGEGGPPGEKGFKGGKGNQGPPGTAGPQGLRGAPGSIGAPGERG
PPGRMGRTGRKGEDGPQGLPGPAGPPGVQGMPGNSGPKGEKGDIGRRGLPGPLGPTGEPG
QTGSKGANGLPGPNGPDGLQGEKGEPGQQGLPGPPGKDGEHGKMGPPGPKGEEGKPGPQG
SPGIRGPIGPPGPKGNAGPPGFPGPQGEPGKQGIKGSPGKDGEDGKQGDTGPPGDQGPPG
QMGLPGASGKPGPEGPAGEQGSTGPPGEKGDRGLTGPTGAIGPTGSQGLPGPQGLPGLRG
SPGPAGDVGVPGKEGSPGQPGLPGSSGQKGQKGRRGRRGPKGHRGEIGIAGSKGETGEKG
EPGMKGPQGPLGVKGEPGPLGLLGTKGGDGPQGLPGLLGPPGPKGVPGSTGPKGETGPSG
PPGPPGPPGELPLLPPELLFQRDAPYDPASDDSDRFKRDAKVNDDCRIGEVCDTPSKSET
SFTPGRGRMNRRRRPNSTPVDRGNKRRRERPRPNKPRQSDGRTFRPSIKRQKGEGMNDFD
VKLMDMYTNIYTMRQDLERMKKPIGTKENPARTCRDLYYGHPKFKDGWYWIDPNLGMPDD
AVYVFCNMTVSGETCVFPDVHASKIINIPWRRTGREDAWFSHLRGGFKITYETTGVVQMT
FLRLLSSYAYQNFTYTCVQSKAWFDEDNLNHNLAIMLMGQDEQIFSIDTIKPNVLTDGCA
TKSGLPGSARTVFEVRTENLAHLPLVDFHPTDYGLPNQAFGFEAGPVCFK
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggacagggcccagcgtctgcgcctcatactgcacggactcatatgggcgtggatctac
cggcatgcagccgcggcggggggcagcctgttggaggcggtgggcgtggcggaacagccg
ctgggcgtggtcgagacgcgagggatgtgtgacgagcgaccgggagaagatggccagccg
gacgtcgcttacaaggtcaccgaacaggctgtcctgaccgtacccaccgctaacctcttc
cctctccgtttccccgaagacttcagcataatggccacgctgaggccggagcaaggctcc
aactccgtcctcttcggcctctactcggacacgggcgaagaccaactcctggcggaggta
ggcgacaccatcaagctcttctaccaggacgagaagggatcgcccgatggaaacaccacc
ctcgagttcggtgcggctatcaacgacggaaagtggcatcggctgggtctgagtgtgaag
gggaacagcgtgacgctactggtggactgtgagaccacctcgaacatcctccttcctcgg
gactctccctcgcacatctccaacgctggcatcatcctcctcggccaacaactcctcgag
gaaaagtacttcgccggagacatccagcagctggacatcgtgtcgggtcccgaggcagcc
tacgaccactgccacacctacatgcccgactgtgacgtcgaactgcccaagtcgccgctg
gtttctcccacacacctcgcgtacgtcaccggcggcgacgaccagactgcgtacacggac
gcgtccgaccccttcgtcgcggacaacgtcaccaccaccgttagtaccaaccgaggcagg
aagggaaggagagggcaaaggacaggaggcctggacgtcgacgctgctgccttcagccca
tcatatcccactggagtactacgaggctatcctggtcccccgggacctccaggtcccctg
ggacctaagggtgatcctgggagagatggtatcccaggaacagatggcctctccggccca
ccaggtcacgtcttcatgatccctctgaatctccaaggcaacgagaaaggtccagaccag
atgctggagcaattccagcagcagctgtctcaacacatgttggccatgaggggatcagct
ggacccatgggtcttaccggcctgcctggacctgaaggaccaccaggagacccaggattg
aaaggagagcctggagacatgggagaaccgggaccccggggtatgcggggtaacatgggc
acgaccggccaacgaggtcgtcgaggacgacctggcagagacggcgagcgaggcctctcc
ggtataccgggatccaagggagaagcgggccttcgaggcctacctggtatgccgggcgag
aagggtcatcgaggtccagttggtctgtctggcgaaccaggtcttccaggtcacgagggc
atgcctggcgagcctggctcccctggtgttaccggtctccccggagagatgggtccgcga
ggattcatcggcccccgagggttccctggtctccctgggccccctggcatccctggaagt
gagggcaccaacggacctgagggtgactcaggacctcctggacagcctggaccccctggt
cagtcaggcccttcaggtcctataggtcctcctggacctcagggtctgctcggtcctcct
ggcccctccggtcctcgtggtaagcccggcttgcctggtttggtcggagctgatggttta
cctggacaccctggcaacccggggatcattggtcctaagggcgacaaagggccggttggt
ccttcgggctcaatgggcttcccaggtcctcgaggggtcaagggtgaccaaggcaacagg
ggcttccagggtgagaagggcaacaaaggagatcgaggacttgacggacccaaaggtgac
atgggtttgaagggaggacgtggagaggttggccctgagggacagatcggcctcgaagga
ccagagggacccaagggtttcgagggtccccggggagagacaggcccaccgggttcatca
ggagagaaggggaagctgggcgtccctgggttcccaggctacccgggccctcctggagac
aagggagacaagggctctccaggtctccaaggtcgacccggagacaaaggcgaacgaggc
aattcaggtcttccaggagaacgaggcgaacaagggccaaggggcttccgtggatctcga
ggccgaagaggaaagactggactttctggcccgaagggcgacaccggtcaacctggaccc
ccaggttcctccggtgagcaaggacctcaggggcctgaaggacctactggcttcgctgga
ccaccaggtcctcctggagtggatggcaaggacggcatcgtaggacctcccggagagaga
ggccctccaggcgagcaagggaatcagggttctaaaggtcctcctggtgttgtgggcccc
gtgggtcctgccggagagtcgggagcagcaggagaaccgggtcccccgggggcccctggt
gttcctggcgaggaaggcagaccgggcgaggcgggcaaagaaggaccaccaggaacgatg
ggacgtccaggcaagaacggaccagtcggaccaccgggcttaccaggcttccccggagag
cgtggtctctcgggcatccccggagccgccggtctcaagggcgagagtggtcctccggga
cccgctggcgccccgggagacaagggggccatggggaccgctggagaagctgggccccaa
ggacccactggcaaggtgggcccccctggtccgcgaggatcctcgggagccaaaggagag
aggggtgatcaaggagtacctggtcccaccggacgagacggtcttctgggtccgcgcggt
ctgcctggacccccgggccccgtgggtgaaccaggagaggatggcgacaagggtgaaggt
ggaccaccaggcgagaagggctttaaaggcggcaagggcaaccagggtcccccgggcaca
gcagggcctcagggtctgcgaggagccccagggtctattggcgccccgggagagcgtggt
cctccaggacggatgggtcggactggcaggaaaggtgaggatggaccccagggtctacca
ggaccagccggacccccaggggtacaaggaatgccagggaactccggaccgaagggtgaa
aaaggtgacattggaaggcgaggtctgcccggtccactgggccctactggggaaccggga
cagacgggcagcaaaggagcgaatggactaccgggacccaatggacctgacggccttcag
ggcgagaagggagaacctggccaacaagggcttcctggtccacctggcaaggatggagaa
cacggaaagatgggccctcctggacctaagggagaagaggggaaacctggacctcagggt
tccccagggatccgaggccccattggtccacctgggcccaagggaaatgctggaccacct
ggcttcccggggccacagggagaacctggtaaacaaggaatcaagggctcccctgggaag
gacggcgaggatggaaagcaaggagacactggtcctcctggtgaccagggtcctcctggc
cagatgggtcttcctggagcgagtggcaaacctggtcctgaaggtcctgctggggaacaa
gggtcgacgggcccgcctggcgagaagggtgatcgaggcttgaccggtccgactggtgcc
attggtcccacaggatctcaaggtttacccggacctcaaggactgcctggtctccgggga
tcacctggtcctgccggcgacgttggcgtacctggcaaggagggcagccccggccaacct
ggacttcctggaagctctggacaaaagggtcagaaaggcagacgaggacgaagaggacct
aaaggacatcgtggagaaatcggtattgctggatctaagggcgagactggagagaaggga
gaacccggaatgaagggtcctcaaggacctcttggcgttaagggagaacctggaccttta
ggtcttctgggaacaaagggaggagacggtccccagggtctgcctgggttactgggtcct
cccggcccgaagggtgttcccggttctacagggccaaagggagagactggtccatcaggt
cccccaggtcctcccggtccaccaggagaactccctctgttgcctccggaacttctcttc
cagcgtgacgccccgtacgatcccgcctccgatgactcggaccgcttcaagagagatgcc
aaggtgaacgacgactgtaggataggcgaagtgtgtgacaccccctctaagtctgaaacc
tcctttactcccgggagaggccgaatgaataggcgtcggagacccaactctaccccggtg
gatagagggaacaagcgccgcagagagcgaccacgtcctaacaaaccccgacaatctgat
ggtcgaacgttcaggcccagcatcaagcgtcagaagggcgagggaatgaacgacttcgac
gtgaagctgatggacatgtacaccaacatctacaccatgaggcaggacctggagcgcatg
aagaaacccatcggtaccaaggagaacccagccaggacctgcagggacctctactacggc
caccccaagtttaaagacggctggtactggatcgaccccaacctgggcatgccagacgac
gctgtgtacgtcttctgcaacatgacggtgtccggtgagacctgcgtcttccccgacgtt
cacgcctccaagatcatcaacattccctggaggagaactggcagggaggacgcttggttc
tctcacctcaggggcggatttaagatcacatatgagacgacgggcgtggttcagatgacg
ttcctgcggctcctctcctcctacgcctaccagaacttcacgtatacctgcgtccagtcc
aaggcttggtttgacgaagacaacctcaaccacaacctagccatcatgctcatggggcag
gacgaacagatattttccatcgatacaatcaaaccgaacgttctcaccgacggatgcgct
acgaaaagtggtctaccagggagtgcgcggacggtatttgaagttcggacggagaacctg
gcccatctacccctcgtcgacttccacccaacagactacggcctccccaaccaagcgttc
ggcttcgaggccggccctgtctgcttcaagtag
DBGET
integrated database retrieval system
