Panulirus ornatus (ornate spiny lobster): 139761786
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Entry
139761786 CDS
T10834
Symbol
dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04140
Autophagy - animal
porn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139761786 (dor)
04148 Efferocytosis
139761786 (dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139761786 (dor)
Membrane trafficking [BR:
porn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139761786 (dor)
Hops complex
139761786 (dor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
zf-RING_Vps41
zf-rbx1
PspA_IM30
zf_RING_Vps8_fungal
Occludin_ELL
zf-C3HC4_2
ALIX_LYPXL_bnd
LETM1_C
DUF1664
zf-C3HC4
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139761786
NCBI-ProteinID:
XP_071542322
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All DBs
Position
42:37974..41630
Genome browser
AA seq
972 aa
AA seq
DB search
MATLFDQYESLQQGLVSTPKQSILGTTAFKNQKLEEEAAIFLKDRQVNFSPTHPITHLVV
SNHHLVLAMANKKLIRINLLNCNSSSLEDQEVDVSKFAVQAKIHSIFLDPTGQHLLISIV
SRDGTTPVDTLYLPLRSSKPKSTTKLKGHLVTAVGWNQRNQSDNMTGPILVGTGRGVIIE
MELTSDERLFQTSHEEYCKQVFDIGKDIPITLTALEVRNSPSDEQRFLLLCTTSDKLYQF
SGHVKSLEERPLFSSIFSNYLGLPPRFIELPSKWKNSWLQLYHTPNSSAPKHFAWLSEQG
VYTGDIVWGGTSDDMIAKRKLLTNPEGNDSCGLPCGIIVCEFHVFIVWPDKIRGLCILNN
QLVFEGTVPEECGKLIGISKDSVKGTIWIFAERGVFRYKVDREGRNVWRIFLEQGNYELA
KKHCNSDPSCLSVVLLQEAQDLFLKKEFLQSARIFAKTLTSFEEISLKFVEVGEEEALKI
YLNEKLDTLKVSEQTQVTLVVMWLLELYLKHLGNLRDAGKQNTQEYSNCDEQLKSLLHDP
KVRQCVTNNATAIYELLSSHDDQDNYVNVSMMLKDYDRVLRHLMRHGRHIEALEVMSTQG
SEQLFYQHFPSLLQTVPGPAVDALIAQGRRLNPIKLLPSLVHCHTSHGSGADILRYLEYC
VDKLETSDEVLHNFLISVYALEAPEKLLPYFKLQGDDSQSVHYDVKFALRECMSVGEDKA
CVHILTTMGLYQEAVELALKLDTSLAKATANRPKYDQDLRKKLWLMIAAHVVQEEQDVSR
AMEVLKECNLIKIEDILPFFPDFVTIDQFKDAICSSLQEYNQHIEDLKQEMDDASKAAEN
IRKDVQKFKQKYSYVHAQDRCCECNYPLLTRPFYLFPCTHKFHQDCLSDSVMGYLSEVKQ
KKVSELKGKLLAISNDESGTGTGLWGDREQIRAEIDNLVAGECLYCGDSVVANVDTPFIS
NRDWDAMMAEWQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctactttatttgaccagtatgagtccttgcagcaaggactggttagtaccccaaag
cagtccatactgggtaccactgcattcaagaatcaaaaactggaggaggaagcggcaata
tttttgaaggatcgtcaggtgaatttctcccccacacacccaatcactcatctggtagtg
tctaaccatcacctagtattggccatggcaaataagaaattgattcgaattaacttgtta
aattgtaattcaagcagtttagaagatcaagaggttgacgtcagcaagttcgccgtacaa
gcgaaaattcacagcatctttcttgaccccacaggtcagcatttgttgataagtattgtg
tcgagggatggaactactcctgttgatactctttacctacccctgcgttccagtaaaccc
aagtctactactaagttgaagggtcatcttgtgacagctgtaggttggaatcagagaaat
cagtcagataatatgactggaccaattttagttggaacaggaagaggagtgatcatagag
atggaattaacctctgatgaaaggctttttcagacaagccatgaggagtattgtaaacaa
gtctttgacattggaaaagatatacccataaccctaacagcattagaagttcgcaactct
ccatcagatgaacagagatttttgttgttgtgtactacttcagataaactctatcaattt
tctggccatgtgaaatctctagaggaaaggcctttgttctcatccattttcagtaattat
ttaggattgccaccaagattcattgaattacctagtaagtggaaaaattcttggctccag
ctatatcatactcccaattcctcagcccccaaacactttgcttggttgtctgaacaagga
gtgtacactggtgatatagtttggggtggaacttcagatgatatgatagcaaaaaggaaa
ctccttacaaacccagaaggtaatgacagctgtggccttccatgtggtattattgtctgt
gagtttcatgtattcattgtttggcctgataagatacgtgggctgtgtattcttaataac
cagttagtgtttgaaggtacagttcctgaagagtgtggaaagttgatcggtatatcaaag
gactctgtcaaaggaactatatggatttttgcagagcgaggtgttttcaggtataaggtt
gatcgagaaggacggaatgtgtggcgcatatttttggaacaaggaaattatgaacttgca
aaaaaacattgtaattctgacccatcgtgcttatctgtggtgctgctgcaagaggcacaa
gatctttttcttaagaaagaatttctccaaagtgcaaggatctttgctaaaaccttaaca
tcatttgaagaaattagcttgaagtttgttgaagtgggagaggaggaagctttaaagata
tacttaaatgaaaaattggataccttaaaagtgagtgagcagacacaggttaccttggtt
gtaatgtggttattagaattgtacctcaaacacttagggaatttacgtgatgcagggaaa
cagaacacacaggagtacagcaactgtgatgaacagctaaaatcccttcttcatgatcca
aaggtacgtcagtgtgtaacaaacaacgctactgccatttatgaattactatcctcccat
gatgatcaggataattatgtgaatgtttcaatgatgttgaaggactatgatcgtgtgttg
cgtcacctgatgcgccatggacgtcacattgaggcactggaggtcatgtcaacccaaggt
tctgaacagctcttctatcagcattttccttcccttcttcaaactgttccaggtcctgca
gtagatgctctgattgcacagggtagaagactaaatcctattaaactccttccaagcctt
gttcattgtcatacttcacatggtagtggagcagatattcttcggtatctagagtactgt
gttgataaattagaaacctctgatgaagttttgcataattttcttatatctgtttatgct
ttggaagctcctgagaaattgttgccctatttcaagctacagggggatgatagccagagt
gtccactatgatgttaaatttgctcttagggaatgtatgtctgttggagaggataaagct
tgtgtccacatcctaaccacaatgggactgtatcaagaagcagtggaattggctctgaaa
cttgatacatccttagcaaaagcaactgctaaccggcctaaatatgatcaagatctgagg
aaaaagctttggctaatgattgctgctcatgtggtacaggaagagcaggatgtgtcccgt
gccatggaggtactgaaggaatgtaaccttataaagattgaggacattcttccttttttc
ccagactttgttacaatcgaccagttcaaggatgccatctgctcttcacttcaagaatat
aaccaacacattgaggacctaaagcaagagatggatgatgcatccaaagcagcagaaaat
attcgtaaagatgtccagaaattcaaacaaaaatactcatatgtacatgcacaagatcga
tgttgtgagtgcaattacccactcctcacacgaccattttacttgtttccatgtactcac
aaattccaccaagattgtttgtcagattcagtaatgggctatctaagtgaagtcaaacaa
aaaaaagtttctgagttgaagggtaaactgttagcaatctcaaatgatgagagtggtaca
ggaacggggttatggggtgacagggagcagattagagctgaaatagacaacttagttgct
ggagagtgtctttattgtggtgatagtgttgtggcaaatgttgatactccatttataagt
aatcgagactgggatgcaatgatggcagaatggcagtaa
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