Panulirus ornatus (ornate spiny lobster): 139761983
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Entry
139761983 CDS
T10834
Symbol
Sin3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139761983 (Sin3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
porn03036
]
139761983 (Sin3A)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139761983 (Sin3A)
REST complex
139761983 (Sin3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
139761983 (Sin3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
139761983
NCBI-ProteinID:
XP_071542843
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All DBs
Position
42:complement(24366409..24573056)
Genome browser
AA seq
1632 aa
AA seq
DB search
MKRRADDLSGRGEAVSGIVSAGGVAGGLTQGGQGVGGCPGGVGGGPGSYVRGPTITQLGA
RPGQPTTPVATAVTAAAVAAAAAGTPVPGVVPVPATTAGQGVGGAPSPLDHQPLNPAPQP
VFTGYAGGKVEMHTGVHHTVPAYSASLPTAPQSQGDGLSGVVEGRVVGGAGGLVAPGGVG
PPPSVLQHVAAHSQVRHKVSGVGSAGVVHQTAAAAVGAAAAAAAAAGATQGSGQFQRLKV
EDALSYLDQVKLRFGKQPQVYNDFLDIMKEFKSQSIDTPGVIARVSQLFRGHPELIVGFN
TFLPPGYKIEVQGNEQVKVSVSVPGQQTTVVHTPQGVHHHITSTHHPPPPPPPTVTVKPP
HHPPPPRSTLPTSVTQHTGPSLVGTHNVHTGSSGGPGPGSGGGSGGAAGGGGGGGGGGGG
SGGGGGGSNSGPGGGTTNASQVASSVSVGSSTPTGTNSGSNSNATSGTTGSAQHSTNTAP
QHPSREPQPPPPHQHHHHHHQSPAQPVEFNHAINYVNKIKLRFQGQPDIYKQFLEILHTY
QKEQRHIKDGGSVPTRTLTETEVYEKVAKLFENQDDLLQEFGQFLPDATNNSAAQAAVSD
FMDQYRTHLGGNKAVSNDHTSVKKSNIKSSCGLGSGNNLVSGPGNTPNKTSPMFGHQLKR
PHSGPTPGHTHSHPQPPVKKPKLGYLKDMSAAEAGKYATLAEYAFFDKVRKALRHEETYH
NFLRCITLYNEEIITRSELVQLVHPFLAKFPDLLKWFKDFVGYREGALGNSDIIPATVTK
QERISGDLAMEIDYTTCKRLGASYCALPKSYPQPKCSGRTSLCKEVLNDTWVSFPSWSED
STFVTSRKTQYEEYIYRCEDERFELDVVLETNLATMRVLEGVHKKLQRMSPEEAARFRLD
DCLGGNSPTIHQRAIRRIYGDKAPDIIDGLKKNPVVAVPLVLRRLKAKDEEWREAQKGFN
KIWREQNEKYYLKSLDHQGITFKQTDVKTIRSKSLLNDIETLFDERHEQAEETGEVITGP
HMVLHYPDKSIIDDAANLVIHHVKRQTTYHKDDKAKIKQIVRHFIPDLLFHPRQEMSDDE
KDMEDDEDEEEDRKSEGKCESANRRDLRGRECKQISSTPCATTTTNNNSNKRKTRNRGIE
QDKESDNKNGRETSGNNSNNNNNNNNNKTKDDNKTKATLNGDATEDEKISIKTEVDDVKV
EVKEEPGMIGNGNVQSDDEYRLFMCNNNWYLFLRLHQILCCRLTTMYEHAVRIAAEEAKD
KKDRKEATAVALRLKPKNEIAVEDYYPAMLDMVKNVLDGNLEPTAYEDTLREMFGIHAYT
GFTMDKVVTGAVRQLQHLVCDDPPAQCTALYLNEAKKGAAGGPVASAHRRLAAEQAYQKK
SERLLQDENCFKIYTYKRNCRMTIELIDTEIEEGEDSGGSVGTGIGNSGTVPSSAHSTIP
PAVAEVERWSEYVEKYVSSVSPQMSPAMQAQLSRKPVFLPRNLRSWRKLTAARQTSQEVE
KGGCAEDIKPPVCPEMDIVDNTQCKFNLSSFKMVFVVNSDSYMYKKQALKRAKQSHEHVS
RRMRSGLISWHGDWCSRHVSEVDQRAATDWFLGHTDGLRPNSTRIVRIDDPSRPPFAPYN
KYKCELEESGGS
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgtgctgatgatctgtctggtcggggcgaggcagtgtcaggcatcgtgagt
gctgggggtgttgctgggggactcacccagggggggcagggggttggaggttgccctggg
ggggttggtgggggcccagggagttacgttcgaggccctactataacacagttaggtgcc
cgtcctggtcagccaactacaccggtagcaacagctgtgacggcagcagccgtagctgct
gcagctgctggaacgcctgtacctggggtggtgcctgtaccagccacaacagcaggccag
ggggttggcggtgcaccttctccccttgatcaccagccccttaatccagcacctcagcct
gtttttacaggttatgctggaggcaaggtcgaaatgcatactggtgttcaccatactgtc
cctgcatattcagctagtctgcccactgcaccccagtcccagggcgatgggctatcgggc
gtggtggagggacgtgttgtgggtggagcgggtgggctggtggccccaggtggagtagga
ccacccccatctgtactccagcacgtggctgcccactcccaggtgcgccacaaggtgtcg
ggagttggcagtgcaggtgtggtccaccagacagcagcagcagctgttggtgcggcagcg
gcagcagcagcagcagctggggctacacaagggtcaggccagtttcagagattgaaagtt
gaagatgcactctcctatttagatcaggtgaagctgaggtttggaaagcagccgcaggtc
tacaatgatttcctggatattatgaaagagttcaagtcacagtctatcgacactcctgga
gtcattgctcgtgtctctcaactcttccgtggtcatccagagctcattgttggcttcaac
acctttcttccgcccggctacaaaattgaggtgcaagggaatgagcaggtgaaggtgagc
gtaagtgtgccaggacaacagacaactgtggttcacacaccccagggagttcatcaccac
atcacctccacacaccaccctcctccacccccaccacccacagtcactgtcaagcccccg
catcatccgccacctcccaggtctacgttacctactagtgtaacacaacacactggacca
agtctggttggcactcacaatgttcatactggtagtagtggagggccagggccaggaagt
ggaggaggcagtggtggggcagctgggggtggtggtggtggaggagggggtgggggaggc
agtggcggtgggggtggtggcagtaattctggccctggaggaggaactaccaatgctagt
caggtagcaagcagtgttagtgttggcagcagcacccccactggcaccaactctggtagc
aattcaaatgccaccagtggtacaacaggtagtgctcagcactccacaaacactgcgcca
cagcacccaagccgtgaacctcagcctcccccgcctcaccagcaccaccatcatcaccat
caatctccggcacaacctgtggagttcaaccatgccatcaattatgttaataagattaag
ttacggtttcaaggacaacctgatatatacaagcagttcctagaaatccttcatacgtac
cagaaggagcagcggcacatcaaagatggaggatctgtacccaccagaacgctcactgag
actgaggtgtatgagaaggttgctaagctgttcgaaaaccaagatgatctacttcaagag
tttggtcagttcctccctgatgccaccaacaattcagcagcccaggcagctgtttcagac
ttcatggaccaataccggactcatcttgggggcaataaggctgtgagcaatgatcataca
tcggtgaagaagtctaatataaaaagcagttgtggtctgggctcgggtaataatctagtg
agtgggcctggtaatacacctaataaaacctcacctatgtttggccaccaactaaagagg
ccacattcgggccccacaccaggtcacacccactctcatccccagccacctgtgaaaaag
ccaaagttggggtatcttaaggacatgagtgctgctgaagctggaaagtatgcaactctg
gctgaatacgccttttttgacaaggttcggaaagctttgcgtcatgaggaaacttaccac
aattttttgcggtgtatcacgttatacaatgaagaaattatcacccgttctgagctggta
cagctagtccaccccttcctcgccaagttccctgatcttctcaagtggtttaaggacttt
gtgggctaccgtgaaggagcattgggaaactctgatataattcctgcaactgtcacaaag
caggagagaataagtggtgatttggctatggaaattgattatacaacttgtaagagacta
ggagcatcttactgtgctctgcccaaatcctatcctcagcctaaatgctctggtcgaaca
agtctctgcaaagaagttctcaatgatacctgggtatcctttccttcttggtcagaggat
tccacttttgtcacctcgcgtaaaacacaatatgaagaatatatatatcggtgtgaagac
gagagatttgagttggatgtggtgctggagacaaacttggcaacaatgcgtgtattggag
ggtgtacacaagaagctccaaaggatgagtccagaggaagctgctagatttagattagat
gattgccttgggggtaactcgcctacgatacaccaaagggctattcgtcgtatatatggc
gataaagcacctgatataattgatggtttaaaaaagaatcccgtcgttgcagtgcctttg
gttctaagaagattaaaagcgaaggatgaggaatggcgggaggcacagaaaggctttaac
aaaatatggagggaacagaacgagaaatactacctaaaatcccttgatcaccaaggaatc
accttcaagcaaactgatgttaaaacaatacgatcaaaaagcttactaaatgacattgaa
acattattcgatgagcgtcatgagcaagcggaggagacaggcgaggtaataactggtccg
cacatggtactccactaccctgacaagtccattattgatgatgcggcaaatcttgtaatc
caccatgtcaagagacagacaacttaccataaagatgataaggccaaaatcaagcaaata
gtcagacattttattcctgacctactgttccatccaagacaagaaatgtctgatgatgag
aaagatatggaagatgatgaagatgaggaggaggatcgtaaaagtgaggggaaatgtgag
agtgccaatagacgcgatcttagagggcgtgagtgcaaacagatctcttccaccccatgt
gccacaaccaccacaaacaataattcaaataagcggaaaacgagaaacagagggattgaa
caggataaggaaagtgataacaaaaatgggagagaaaccagtgggaacaatagtaataat
aataataacaacaacaacaacaaaaccaaagatgataataaaactaaagccactttaaat
ggagatgcgactgaagatgaaaaaattagtataaagactgaggttgatgatgtaaaggta
gaagtgaaagaagaacctggaatgattgggaatgggaatgtccagtcggatgatgagtat
agattatttatgtgcaacaacaattggtacctttttctacggttacaccaaattttgtgc
tgtcgtctcaccaccatgtatgaacatgctgtacggatagctgcggaggaagcaaaagat
aaaaaagatcggaaagaagccacagcagttgctcttagattaaaaccaaaaaatgaaata
gcagttgaagactattaccccgccatgttagatatggtgaagaatgttttagatggtaat
ttggaacccacagcatatgaagatactttacgtgaaatgtttggaatccatgcgtacact
ggattcacaatggataaggtagtaactggagcagtgagacagttgcagcatctggtgtgt
gatgatcccccagcccagtgtactgccttgtacctgaacgaagccaaaaaaggtgctgca
ggtggtcctgttgcatctgcacaccgacgattagctgcagaacaagcataccagaaaaag
tcggaacgcctcctacaggatgaaaattgcttcaaaatttatacgtataagaggaactgt
agaatgaccatagaactgatagacactgagatagaggaaggggaagatagtggaggtagt
gttggaactggaattggtaatagtggtacagttccctcctctgctcattcaaccattcca
cctgctgttgctgaagtagagagatggagtgaatatgtggagaagtatgtctcgtccgtt
tcaccacaaatgtctcctgctatgcaggcccaactgtccagaaagccggtatttttacca
cgcaaccttcgctcttggagaaagctaactgcagccagacaaaccagccaagaggttgaa
aagggtggctgtgcagaggacatcaagcctccagtatgtcctgaaatggacattgtcgac
aacacacagtgcaaattcaacctgtcttcattcaagatggtgtttgtagtcaatagtgat
tcatacatgtacaagaagcaggcactcaagcgggccaaacaaagtcatgaacatgtaagt
cgaaggatgcgcagtggcttaatatcatggcatggtgattggtgctcaagacatgtgtct
gaggtagatcagcgagctgccacagattggtttttgggacacacagatgggttacgacct
aactccacaagaatagtgcgtattgatgacccctcccgaccaccttttgcaccctataac
aagtacaagtgtgaactagaagagagtggagggtcctaa
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integrated database retrieval system
