Panulirus ornatus (ornate spiny lobster): 139762526
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Entry
139762526 CDS
T10834
Name
(RefSeq) mitochondrial tRNA methylthiotransferase CDK5RAP1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
porn03016
]
139762526
Enzymes [BR:
porn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
139762526
Transfer RNA biogenesis [BR:
porn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
139762526
Prokaryotic type
Methylthiotransferases
139762526
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-GeneID:
139762526
NCBI-ProteinID:
XP_071543624
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All DBs
Position
43:32443533..32459773
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AA seq
653 aa
AA seq
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MPLWTSKHTVSSFIKLRNLTVTSYQISNLLTAKSAEALNTVCRRKSHQPLLEVSLRSTVN
VALERNSSESCNYNFTGSLCLKYRMNRLFRRKARPEFRQYSSFHTSAFTQCSNSQARQRR
LKPGPGLEFFIANNNSADNKICKRDLEKLSHPYINVEDVNGRGRKVYFDVYGCQMNVNDT
EVAWSVLQDCGYVRTSKMEVADVVLVMTCSIREGAEQKVWNKLNYLKGLKNKRSKNRKAT
PMKIGILGCMAERLKKKLVEKEKSIDVVVGPDSYRDLPRLLAIVEEGETAVNVLLSMEET
YADIVPVSFSASRMSAYVSVMRGCDNMCAYCIVPFTRGRERSRDIHSILEEVRYLSDQGI
KEITLLGQNVNSYRDTSEVPHASFSINKVEETHLVKGFKTIYKPKKGGMRFADLLDKVSQ
VDPEIRIRFTSPHPKDFPDEVLYLIQERNNICKNIHLPAQSGNTRILELMRRGYTREAYC
ELVAHIRTIIPGVSLSSDFICGFCSETEAEFEETLSLMREVKYNFCYMFPYSLREKTPAH
RKLVDDIPYSVKLNRLERMNEVFRFEVIKINRAQIGQQQLVLVEGTSKRSSLHLVGRNDS
NTRVIFPDVEIEDTNGTTKKAQPGDYISIRITDSTPQVLKGTPIAITTLQAHE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtggacaagtaaacacactgtgagttcctttatcaaactaaggaacttgaca
gtaacttcataccagatcagtaatctactaacagctaagtcagctgaagcactgaatacg
gtttgcagaagaaagtcacaccaacccttgctggaagtcagtttacgttctacagtaaat
gttgctttagagaggaatagctcagaaagttgcaattataattttacaggttctctctgt
ttaaaatatagaatgaatcgtctgtttagaaggaaggctagacctgaatttcgacaatat
tcatccttccatacctcagctttcacacaatgtagcaattctcaggcaaggcaaagaaga
cttaagccgggtcctggtttagagttttttattgctaataataattctgctgataataag
atttgcaaaagagacttggaaaaattatcacacccatatataaatgttgaagacgttaat
ggtcgtggccgtaaagtttattttgatgtttatggctgccagatgaacgtaaatgacacc
gaagtagcttggtctgttcttcaagattgtggttatgtccgcaccagcaagatggaagta
gcagatgtagtgctggtcatgacatgttcaattagggaaggagctgaacagaaggtgtgg
aataaattgaattaccttaagggtctcaaaaacaagcggtctaaaaataggaaagctacg
cctatgaagattgggatactaggatgtatggcagaacgactgaaaaaaaaactggtggaa
aaagagaagagcatagatgttgtggttggccctgatagttaccgtgatcttccgaggctt
ttggcaattgttgaagaaggtgaaacagcagttaatgttttactatccatggaggagact
tatgctgacatagtacctgtgagtttttcagcaagtagaatgtccgcctatgtatcggta
atgcgtggctgtgataatatgtgtgcatactgtattgtgccttttactcgagggcgagaa
cgttcaagggatattcactccatccttgaggaagtgagatacctatctgatcaaggaatt
aaagaaataactctcttaggccagaatgtgaacagttaccgagacacatcggaagtacca
catgcaagcttctcaataaataaagttgaagaaactcacttggtcaagggattcaaaaca
atatacaagcccaaaaagggtggaatgaggtttgcagatctcttggacaaggtgtctcaa
gttgatcctgaaatacgtatcagatttacctctcctcatcctaaagacttcccagatgaa
gtactatacctaattcaagagagaaacaacatctgtaaaaatatacacctcccagctcag
tccggcaatacaagaattttggaactcatgcgaagaggctataccagagaagcatattgt
gaattggtagctcacatacggactatcatcccaggtgtatccttatcatcagatttcata
tgtggcttttgctcagagactgaagcagagtttgaggaaactctttctctaatgcgagaa
gtcaagtataacttttgctacatgttcccgtatagtcttcgtgagaaaacaccagctcat
cgcaaattagtggatgatattccttattcagttaaactcaatcgtctggagagaatgaat
gaagtcttccgttttgaggtcatcaagattaatagagctcagattggacagcagcaactg
gtcttagtggaagggaccagtaagcgttctagtttgcatcttgttggtagaaatgacagc
aataccagggtgatcttcccagatgtagaaattgaggatacaaatggcaccacaaaaaaa
gcccaacctggagactacatttccataagaattacagattcgaccccacaagtcttgaaa
ggtactcctattgccatcaccacacttcaagctcatgaataa
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