Panulirus ornatus (ornate spiny lobster): 139762528
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Entry
139762528 CDS
T10834
Symbol
heph
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139762528 (heph)
03041 Spliceosome [BR:
porn03041
]
139762528 (heph)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139762528 (heph)
Spliceosome [BR:
porn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139762528 (heph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
139762528
NCBI-ProteinID:
XP_071543631
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All DBs
Position
3:53007675..53511207
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AA seq
633 aa
AA seq
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MKRPVSEVYCPSPYLAVPHLQAVPAVQAVVPPPQATPVPFTPAFSPAFTHSLTPVSVTPA
LTPVSVPPAVTHFTPMMHFIDQRGSDELLSQTGAVSNGSVMSPAPNHADNNNDAKKVKLD
TKNPGAPSRVIHIRNIPNEVTEAEIVHLGIPFGKVTNVLVLKGKNQAFLEMSDEVAATTM
VNYFTNCTAQLRGRAVYVQFSNHKELKTDQNHSNANPSAQAALQAAQALVNQTDTQGGPN
TVLRVIVEHMIYPVTLDVLYQIFSRVGKVLKIVTFTKNNTFQALIQYPDVVTAQAAKMTL
DGQNIYNACCTLRIEYSKLSNLNVKYNNDKSRDYTNPNLPTGDPALDSALAIGGAPGALA
SPFAAMHGLSSPLTAAYGASPAGVSSLSAPNLNLPNRTGENASATGMPFTGMPLAGVTPT
AAALGAAGIRLPGQPSPNCVLLVSNLNEEMVTPDALFTLFGVYGDVLRVKILFNKKDNAL
VQMSEPHQTQLAISHLDKMKTWGKQIRVTLSKHQTVQLPKEGQPDAGLTKDYTNSPLHRF
KKPGSKNYQNIYPPSATLHLSNIPPTVDEEQIKDAFTHAGASVKAFKFFPKDRKMALIQL
GSVEEAIAALIKMHNFQLSDSSHLRVSFSKSTI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcctgtgtcagaagtgtactgcccatcgccctacctcgctgttccgcatctg
caggccgtgccggccgtgcaggctgtcgtgcccccaccacaggccacccctgtgcccttt
acgcctgccttctcaccggccttcacgcactccctcacgcctgtgtcggtgaccccagcc
ctcacgcctgtgtctgtgcctccagcagtcacccacttcacccccatgatgcacttcatt
gatcagcgtggctccgatgagctgctgtcgcagaccggagcggtgagcaatgggtccgtc
atgagcccggctcccaaccacgccgacaacaacaatgacgcaaaaaaggtgaagttggac
acgaagaacccaggggccccgtcccgcgtgatccacatccgcaacatccccaatgaggtg
acagaggccgagatcgtccacctgggtattcccttcggcaaggtcaccaatgtcctcgtc
ctcaagggcaagaaccaggcattcctggagatgtccgatgaagtggccgccaccacgatg
gtcaactacttcaccaactgtaccgcccagctgcgtggccgcgccgtctacgtccagttt
tcaaaccacaaagagctcaagaccgaccaaaatcactcaaacgcaaacccaagtgcacaa
gcggcgttgcaggcagcccaagctctggtgaaccagaccgatacccagggcggcccgaac
actgttctgcgcgtcatcgtagagcacatgatctacccagtcaccctcgatgttctctat
cagatcttctcacgtgttggcaaagtgctcaagatagttacattcacaaagaacaataca
ttccaggccttgatccagtaccctgatgtagtaactgctcaggcagccaaaatgacacta
gatgggcagaatatctacaacgcctgctgcacattgcgtattgagtacagcaagctgagc
aacctcaatgtgaagtacaacaatgacaaatctcgggactacaccaaccctaaccttcca
acgggtgaccctgccctggactctgccctggctattggtggtgcccccggtgcgctagcc
tccccgtttgctgcaatgcatggactctcgtcgccgctaaccgctgcctatggggcctca
cctgcgggagtttcttctctttcagctcctaatctgaacttaccgaaccgtactggcgag
aatgcttcagcaacaggcatgccattcacaggtatgcccttggcaggcgttacacccact
gctgctgctcttggtgctgcagggatccgtctgccgggccaaccctcgccaaactgtgtc
ctgctagtgtccaacttaaacgaggagatggtcacgcctgatgctctctttaccctcttc
ggagtgtacggagatgttttgcgggtcaagattctcttcaataagaaggataatgccttg
gtacagatgtctgaaccacaccagacccagcttgcaatctctcatctggacaaaatgaaa
acctggggcaaacagattcgggtaactctgagcaagcatcagactgtgcaacttcccaag
gaaggacaaccagatgctggtctcaccaaggactatacaaactctcctctccaccgcttc
aagaaaccaggctccaagaattatcagaatatctaccccccaagtgctacattgcatctg
tccaacatcccaccaactgttgatgaggaacaaattaaagatgccttcactcatgctggc
gcttccgttaaggcattcaagttcttccctaaagacaggaagatggccctgattcagctg
ggttctgtagaggaagccattgctgcactcattaaaatgcacaacttccagctgagcgac
tcttctcacctacgtgtgagcttcagcaagagcaccatctag
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