Panulirus ornatus (ornate spiny lobster): 139762682
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Entry
139762682 CDS
T10834
Symbol
Clp
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139762682 (Clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139762682 (Clp)
03019 Messenger RNA biogenesis [BR:
porn03019
]
139762682 (Clp)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139762682 (Clp)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139762682 (Clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C2H2_10
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
139762682
NCBI-ProteinID:
XP_071543744
LinkDB
All DBs
Position
44:complement(4487825..4503574)
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AA seq
276 aa
AA seq
DB search
MEVIVANVDKVTFDIEAQLEEQVGAQTLPFPGMDKSIAAVCTFFMRGTCSKSTSCPFRHV
RGDRTVVCKHWLRGLCKKGDLCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHINPDMK
MKDCPWYDRGFCRHGPQCRNRHVRRVLCMNYFAGLCPEGSNCKFMHPRFELPQVMDDKQL
PHKKQGLTCHYCGEAGHKASHCFKANPEFREQNAIISLASGGPRNQPGKENSGPPLPHPI
DSNSRLDNIICFKCGQQGHFANRCSKGQFAFLSSGN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgattgtggcgaatgtggacaaggttaccttcgacattgaggcccagcttgag
gagcaagtgggagcccagacactgcctttccctggcatggacaaatcaatagctgcagtg
tgtacattttttatgcgtgggacctgcagcaaaagtaccagctgcccatttcgtcatgta
cgtggagatagaactgtagtatgtaagcactggctccgtggtttgtgcaagaagggtgac
ctgtgtgagtttcttcacgaatatgacatgtcaaaaatgccagagtgctatttctattca
cgcttcaatgcctgccacaacaaagagtgtccattcctacacattaacccagacatgaag
atgaaggactgcccatggtatgatagaggattttgccgtcatggtcctcagtgtcgaaat
cgtcatgttaggcgggtcctttgcatgaactattttgctggtctttgtccagagggatcc
aattgcaagtttatgcacccaagatttgaactgccacaggtcatggatgacaagcagcta
cctcataagaaacagggactcacttgccactactgtggagaagcagggcacaaagcttct
cactgcttcaaggccaatcctgaatttagagaacagaatgcaataattagtttggcttca
ggtggaccgaggaatcagccaggcaaagaaaattctgggccccctctaccccatcctatt
gatagcaacagtcgccttgataacattatttgtttcaagtgtggtcagcaaggtcacttt
gcaaacagatgttccaaaggccagtttgcctttcttagttctgggaactaa
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integrated database retrieval system
