Panulirus ornatus (ornate spiny lobster): 139763117
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Entry
139763117 CDS
T10834
Symbol
PolD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030
DNA replication
porn03410
Base excision repair
porn03420
Nucleotide excision repair
porn03430
Mismatch repair
porn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139763117 (PolD1)
03410 Base excision repair
139763117 (PolD1)
03420 Nucleotide excision repair
139763117 (PolD1)
03430 Mismatch repair
139763117 (PolD1)
03440 Homologous recombination
139763117 (PolD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139763117 (PolD1)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139763117 (PolD1)
Enzymes [BR:
porn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139763117 (PolD1)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
139763117 (PolD1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
139763117 (PolD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
139763117 (PolD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
139763117
NCBI-ProteinID:
XP_071544878
LinkDB
All DBs
Position
46:complement(8200155..8302754)
Genome browser
AA seq
1089 aa
AA seq
DB search
MDKRPRTAGGSNSGPPKKPKMEDEDDDDFNDTFPDGADFEEMFQRDSEEIQGDEFEDTES
THSSWSRPPVASLDPQEESFVFQQIEIDYYIGNPIQGMPGQQVGKVPVMRMFGINDSGNS
VCCHVHGFSPYFYVTCPPSFKDVHLGEFKNVLNQVLLGDMKSNKENITDTVLAVDIVKKE
SIYGFHGNRKVPFLKITLARPRLIAAAKRLLGEGKVFLSSIGTPVYEAYESNIDFEIRFM
VDTHLVGCCWVELPAKTWTIRKDRLDTRCQLEVDVAWNQFKAHEPEGEWARVAPLRILSF
DIECAGRKGVFPEYDKDPVIQIGNMVIRQGEAEPFVRTIFTFKKCAPIVASKVQSFENEK
DMLEHWAGFVRDVDPDIITGYNINNFDFPYLLNRANHLKSEKFSYLGRVKYIRTVIKDTM
LQSRQMGKRENKSINTEGRCQFDLLMILVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIIS
DLQNGNPQTRRRLAVYCLKDALLPLRLLDKLMCIINYMEMARVTGVPLSYLLTRGQQIKV
ISQLLRKAVEQDLVLPVHKGAGEDAYEGATVIEPRKGYYDKPIATLDFSSLYPSIMMAHN
LCYTTLLQGPNKAQEYGLSPGDYIKTPSGNYFVKASTRKGLLPEILESLLGARKKAKNDL
KNETDPLRMKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRTMIAFTKNQ
IEEKYIMENGYAQNAEVVYGDTDSVMIKFGVETVAEAMELGREAATYVTEKFVKPIKLEF
EKVYFPYLLINKKRYAGLYFTKPDKHDKMDCKGIETVRRDNCPIVANLINMCLQKILIER
NPSGAVDHAKQTISDLLCNRIDISQLVITKELTKTEKEYAAKQAHVELANKMKKRDPGTA
PKLGDRVPFVIIAGAKGIPAYEKAEDPIYVLENSLPIDYEYYLSNQLSKPLKRIFEPILG
EKVESQLLKGDHTRSRIITHSKVGAMAKFVTKKASCVGCKVPISSVTEALCKHCKLRESE
IYMQQMETLGTLEERFSRLWTQCQRCQGSIHEEVICTSRDCPIFYMRKKVQIELSAQDKV
VQRFGAPAW
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagacctagaacagccggtggaagtaattcagggccgcccaaaaagcctaag
atggaggacgaggatgacgatgactttaatgacacgttcccagatggagcagactttgaa
gaaatgtttcagagggatagtgaagagatacagggtgatgaattcgaggacacagaaagc
actcacagttcttggagtcgacctcctgttgcttcattagatcctcaggaagaatctttt
gtgttccagcagattgaaatcgattattatattggaaaccccattcaaggaatgccagga
cagcaagttggcaaagtaccagtaatgcgcatgtttggtattaatgattccgggaactcg
gtttgttgtcatgttcatggattctcaccatacttctatgtgacctgtccaccatcattt
aaagatgttcacctgggagaattcaagaatgttctcaatcaagtgcttcttggtgacatg
aagtccaacaaagaaaatataacagatactgtgttagctgtggacatagtcaagaaagag
agtatatatggctttcatggcaataggaaagtacctttcttgaagataacacttgctcgc
cccagactgattgctgcagcaaagcgacttcttggggagggaaaagttttcctgtcaagc
attggaactcctgtatatgaagcttatgaatctaatattgatttcgaaatcagatttatg
gtagacactcacttagtgggctgttgttgggtagagcttccagccaagacctggaccatc
agaaaagacaggcttgacacccgatgtcagctggaggtggacgtagcttggaatcagttc
aaagctcatgaaccagagggagaatgggcacgagtggctcctctccgaattctttccttt
gacatagaatgtgctggacgcaaaggtgtgtttcctgagtatgataaggatccagtgatt
cagattggcaacatggtaattcgtcagggtgaagctgaaccctttgtacgtaccatattc
acctttaagaaatgtgctccaattgttgcttctaaggttcagtcttttgaaaatgaaaag
gatatgttggagcattgggccgggtttgtgcgtgatgtggatccagatatcatcacaggc
tacaacatcaacaactttgattttccttatttgttgaatagggcaaatcacttgaaatca
gagaaattttcttaccttgggagagtaaaatatatcagaactgtcattaaggataccatg
ctgcagagtagacagatgggcaaacgtgagaacaaatctattaatacagagggacgctgc
cagtttgatctgctcatgattttggtaagagattataagctgcgctcttacaccttaaat
gctgtatcctaccacttcctccaagagcagaaggaagatgttcatcattccattattagt
gatctacagaatggaaacccacagacacgcagaagattagctgtgtattgcttgaaagat
gctctccttcccttacgtttattagacaagctcatgtgcataatcaactacatggagatg
gctcgagtgacaggtgttcctttgtcgtacctccttactcgtggccaacaaattaaggtt
atatcacagcttcttagaaaggctgttgaacaagatttagtcctgccagttcacaaaggt
gcaggagaagatgcgtatgagggagcaacagtgatagaaccacgcaagggctactatgat
aagccaatagctacgttggatttctcgtctctgtatccatctatcatgatggcccacaac
ctctgctatactacattgctgcaggggcctaacaaggctcaggaatatgggctttctcca
ggggactatatcaagactccttctggaaattattttgttaaagcatcaacacgcaagggt
cttcttccagaaattcttgagtctcttttaggagcgaggaaaaaagccaaaaatgacctt
aagaatgagacagatcctctaagaatgaaggtgctagatggtcggcagttggcgctaaaa
atttcagcaaactcggtatatggtttcacaggtgctcaagtgggcaagttaccttgtctg
gagatttcccagagtgtaactgcttttggacggacaatgattgcctttacaaagaaccag
attgaggaaaagtatatcatggaaaatggatatgcacagaatgctgaggttgtgtatgga
gacacagactctgtgatgataaaatttggtgtggagactgtagcagaagcgatggaactt
gggcgggaggctgccacatatgtcacagaaaaatttgtcaaacctataaagctagagttt
gaaaaggtgtacttcccatatttattgatcaacaagaagcgttacgcaggactgtatttt
accaaaccggacaaacatgataaaatggactgtaagggtattgagactgtaaggcgagat
aattgtcccattgtggccaacctcattaacatgtgtctacaaaagatcctaattgaaaga
aatccaagtggagctgttgatcatgccaaacagacaatatcagatttgctatgcaatcgg
attgacatatcacaacttgtcatcaccaaggaattgacaaaaacagagaaggaatatgct
gccaaacaagctcatgtggagcttgcaaataagatgaagaaaagagacccaggcactgcc
cctaaactgggagaccgagttccttttgtgattattgctggtgctaagggcattcctgca
tacgagaaggctgaggaccctatttatgtgttggagaacagcctgcctattgactatgaa
tactatctttcaaatcaactcagcaaacccttaaaaagaatctttgaaccgatcctaggg
gagaaggttgaatcacaactgttgaagggtgaccacacaagatccagaatcattacgcat
agcaaagtaggagccatggccaagttcgttactaaaaaggcatcatgtgttggttgcaaa
gttccaataagctcagtaactgaggccctctgtaagcattgcaagcttcgtgaaagtgag
atatacatgcagcaaatggaaacattaggtactttagaggaaaggttttccagattgtgg
acccagtgtcaacgctgccaaggatccattcatgaggaagttatttgcactagtcgagac
tgtccaatattttatatgaggaaaaaagtacaaatagaactgtcagctcaagataaagtt
gtacaaaggtttggtgccccagcatggtag
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integrated database retrieval system
