Panulirus ornatus (ornate spiny lobster): 139763196
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Entry
139763196 CDS
T10834
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139763196
09123 Folding, sorting and degradation
03018 RNA degradation
139763196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139763196
03041 Spliceosome [BR:
porn03041
]
139763196
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139763196
mRNA degradation factors
5'-3' decay
Lsm complex
139763196
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139763196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
RII_binding_1
Motif
Other DBs
NCBI-GeneID:
139763196
NCBI-ProteinID:
XP_071545035
LinkDB
All DBs
Position
46:complement(32743943..32747434)
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AA seq
96 aa
AA seq
DB search
MANTLESYVNHLVSVITADGRNIVGTLKGFDQTINLIMDECHERVYSSHRGVEQVILGLY
VVRGDNVALIGEVDEDLDSRLDLENIRAEPLNECKT
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggccaatactcttgagagctatgttaatcatttggtgtctgtgataacagctgatggg
agaaatattgtgggaacactgaaggggtttgatcaaacgataaacctgatcatggatgaa
tgtcacgagcgagtctacagctctcatcgaggtgttgaacaagttattctgggactttat
gtcgtcagaggggataatgtagctctcataggagaagtggatgaagacttggattcaaga
ttagatttagaaaatattcgagcagaacctctcaatgaatgtaaaacgtga
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