Panulirus ornatus (ornate spiny lobster): 139763248
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Entry
139763248 CDS
T10834
Symbol
LSm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139763248 (LSm7)
09123 Folding, sorting and degradation
03018 RNA degradation
139763248 (LSm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139763248 (LSm7)
03041 Spliceosome [BR:
porn03041
]
139763248 (LSm7)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139763248 (LSm7)
mRNA degradation factors
5'-3' decay
Lsm complex
139763248 (LSm7)
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139763248 (LSm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
139763248
NCBI-ProteinID:
XP_071545271
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All DBs
Position
3:complement(71062911..71068497)
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AA seq
120 aa
AA seq
DB search
MIQKPGGGGGERREGGRDGEQKDKKRKESILDLSKYLDKAIRVKFSGGREASGILKGFDQ
LLNLVLDNTIEYLRDPDDPYKLTEDTKERGLVVCRGTAVVLICPMDGCEAISNPFVQQET
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaagccagggggaggaggaggtgagcgccgagaaggaggcagagatggagaa
cagaaggacaagaaacggaaggaatccattcttgatttaagcaagtacctggacaaggct
ataagagtcaaattttctggtggacgtgaagcctcaggaattctgaaaggatttgatcag
ttattgaatcttgtgctggataataccattgagtatcttagagatcctgatgatccatac
aagctgactgaagacacaaaagagagagggttggttgtatgtcgtgggacagcagttgta
cttatttgcccaatggatggttgtgaagcaatttctaacccttttgtacaacaagaaacc
tag
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