Panulirus ornatus (ornate spiny lobster): 139763527
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Entry
139763527 CDS
T10834
Symbol
Dbp80
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013
Nucleocytoplasmic transport
porn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139763527 (Dbp80)
03015 mRNA surveillance pathway
139763527 (Dbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139763527 (Dbp80)
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139763527 (Dbp80)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139763527 (Dbp80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TPR
Cas3-like_C_2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
139763527
NCBI-ProteinID:
XP_071545804
LinkDB
All DBs
Position
47:9133392..9152827
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AA seq
497 aa
AA seq
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MSDDWAKAAEEQEARDLATQVETLKLLKTEEDGTPNAKEKDETKEGNDANENKETNDIKE
TTGETTSEENVTLAELSLMRKVMRKGIVESKNNVEVYRKDPKNPLYSVKTFEALNLRKEL
LEGIYDMGFKLPSKIQEISLPTLLAEPPANMIAQSQSGTGKTAAFTLAMLSRIDPKKKCC
QALVLSPTMELALQTLQCVKQMGKKCTDITVRSAVKGNTVPRGHKITDHIVIGTPGKVVD
WVTKYKSLDLRQCRVFVLDEADVMIATQGHQDQSVRIHKQLPPTCQMMLFSATYVDEVVT
FAEAIIKDPVTLRLRREEETLTNIRQMYVECNSEEEKYQAISNIYSIPVGSAMFFCHTKH
NATWLANRLKEDGHQVGLLTGDLTADERVRVLLRFREGTERVLICTNVLARGIDVDTVNL
VVNYDLPQMFGSHKADCETYLHRIGRTGRFGKTGNAINIVDGQDDLRLLREIEQHFNIKI
VKLDYNNIDEIEKLGED
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgactgggctaaggcggcggaggagcaggaggccagggacctggcaacccag
gttgaaaccctaaagctactcaaaactgaagaagatggaacacccaatgcaaaagagaaa
gacgagacaaaagagggaaatgatgcaaacgagaacaaagagaccaatgatattaaagaa
accacaggtgagactacatcagaggagaatgttacgctggcagagctgtcactgatgagg
aaggtgatgagaaaaggtattgttgagtccaagaacaatgtagaggtatatcgcaaagac
cctaagaatcccctctatagtgtcaagacatttgaggccctcaacctacgaaaggaatta
ctcgaggggatatatgatatgggatttaagcttccatcaaaaattcaggaaatctcactt
ccaacacttttagctgagccgcctgccaatatgattgcccaatcgcagtcaggtacaggg
aagactgcagcatttacattggccatgttgagtcgcattgaccccaagaaaaagtgttgc
caggcgttggttttgtctccaacaatggagttggcactacagacactccagtgtgtgaag
cagatgggaaaaaaatgtaccgacatcactgttcgctctgctgtaaagggaaatacagtt
cctcgaggacacaaaatcactgaccacatagtcattggtacaccagggaaagtggttgac
tgggttaccaaatacaaaagccttgaccttcgtcagtgtcgggtgtttgtccttgatgaa
gcagatgttatgattgccactcagggccatcaggaccagtctgtgcgtattcataaacag
cttccaccaacctgccagatgatgctcttttcagccacttacgttgatgaggtggttact
tttgctgaggcaatcattaaggacccagtcacacttcgtctgcgaagggaagaagaaacg
ctgacaaatatccgacagatgtatgttgaatgtaacagtgaagaagaaaagtaccaggca
atttctaatatctattccattccggtgggtagtgcaatgtttttctgccacacgaagcat
aatgctacttggctggcaaaccgacttaaagaagatggacaccaagttggtttactcaca
ggtgatctaacagcagatgaaagagtacgagtgctgcttcggttccgtgagggaactgaa
agggtgctcatctgcacaaacgtcttggctcgtggcattgatgttgatactgtcaactta
gtggttaattatgaccttcctcaaatgtttgggtcacacaaggcagattgtgagacttac
ttgcatcgaattggacgcactggccgctttggcaagactggaaatgctatcaacatagtg
gatggacaagatgaccttcggcttttaagggaaattgagcagcacttcaatatcaaaatt
gtcaagctggactacaacaacattgatgaaattgagaagctgggtgaggattaa
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