Panulirus ornatus (ornate spiny lobster): 139763605
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Entry
139763605 CDS
T10834
Symbol
Rrp4
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139763605 (Rrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139763605 (Rrp4)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139763605 (Rrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
139763605 (Rrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
139763605
NCBI-ProteinID:
XP_071545919
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Position
3:complement(73673617..73679576)
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AA seq
290 aa
AA seq
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MEIQLACEIHRVKAMVGIQVSGRNNLVTPGDIIFRDTSFMRGHGTYMEEGVQVASVAGYV
TRVNRLITVTPLRQVYQGAVGDTVVGRITQVQNNRWKVDVNSRLDAELRLVNIQLPGGEQ
RRSNLEDERGMRGLLREGDLVCVEVQKITDDGLLRLAARSNKFGKLSQGTLLAVSPSLIV
QDKQRMHDLPCGARVVFGANGYVYITPTVPQEQSSTYTVNFEEVPVDIRKTIGRLRNCIK
LLAHHSIMISPTSVMTAFDLSTEQEFEIKDLLKPDVMQDVAMATVQLMNE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaactcgcttgtgagatccatcgggtgaaggcgatggttggtatccaagta
tcaggaaggaacaacttggttaccccaggagatatcatattcagggatacaagttttatg
agaggtcatggaacttacatggaagaaggagttcaggtagcatcagttgcaggctatgtg
acaagagtcaatcgtctgataacagtaactccattgcggcaagtatatcaaggagcagtt
ggtgacacagtagttggacgcatcactcaagttcagaataacagatggaaagttgatgta
aattcaagattggatgctgaattacgactagtgaatattcagttgccaggaggagagcag
cgccgcagcaatttggaggatgaacgtggaatgcgaggactgttacgagaaggtgatttg
gtctgtgtggaggttcaaaagataactgatgatggcttgttgagacttgctgcaagatcc
aataagtttggaaagctgtcccagggaactctcctggctgtgtcaccatcactaattgtt
caagataaacagagaatgcatgaccttccgtgtggtgcaagagttgtgtttggggcaaat
ggctatgtttacataaccccaacagtaccccaagaacagtcctcaacttatacagtcaac
tttgaagaggtgccagtagacattcgcaagacaattggacgtttacgtaactgtattaaa
cttctagcacaccattccatcatgatttccccaacgagtgtgatgactgcctttgaccta
tccactgagcaagaatttgagattaaagacttgttaaaacctgatgtaatgcaggatgtg
gccatggcaacagtgcagttgatgaatgagtga
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