Panulirus ornatus (ornate spiny lobster): 139764094
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Entry
139764094 CDS
T10834
Symbol
SmD3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139764094 (SmD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139764094 (SmD3)
03041 Spliceosome [BR:
porn03041
]
139764094 (SmD3)
03032 DNA replication proteins [BR:
porn03032
]
139764094 (SmD3)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
139764094 (SmD3)
Spliceosome [BR:
porn03041
]
Complex A
U1 snRNP components
Sm proteins
139764094 (SmD3)
U2 snRNP components
139764094 (SmD3)
Complex B
U1 snRNP components
139764094 (SmD3)
U4/U6.U5 tri-snRNP components
139764094 (SmD3)
Complex C
U2 snRNP components
139764094 (SmD3)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
139764094 (SmD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
139764094
NCBI-ProteinID:
XP_071546690
LinkDB
All DBs
Position
48:complement(13117387..13162362)
Genome browser
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHTVTVETMLGEVYRGKLLEAEDNMNVQMESCTVTYRNGQTARLEN
VFIRGSKIRFLILPDMLKNAPMFKNMTGRKGGAAGSGKSAILRAQAARGRGRGGRGGRGW
GPGGPMRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattggtgtccccatcaaagtgcttcatgaagctgagggacacacagtaactgtt
gagaccatgctaggagaggtttaccgtggcaagttattggaagcagaagataatatgaat
gttcagatggagtcatgtactgttacttaccgtaatggacagacagctagattggaaaat
gtattcatccgtggctcaaagatacggtttctcattttgcctgatatgctgaagaatgca
cctatgtttaaaaatatgacgggcaggaaaggaggagcagcgggtagtggtaaatccgct
attctgagagcacaagctgcacgtggtcgaggaagaggtggcagaggtggaagaggatgg
ggtcctggtggccccatgagacgatag
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integrated database retrieval system
