Panulirus ornatus (ornate spiny lobster): 139764518
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Entry
139764518 CDS
T10834
Symbol
Tfb1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
porn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139764518 (Tfb1)
09124 Replication and repair
03420 Nucleotide excision repair
139764518 (Tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139764518 (Tfb1)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139764518 (Tfb1)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139764518 (Tfb1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139764518 (Tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GRAM
BBL5
GlutR_N
Motif
Other DBs
NCBI-GeneID:
139764518
NCBI-ProteinID:
XP_071547264
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All DBs
Position
50:4223111..4267129
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AA seq
552 aa
AA seq
DB search
MTVCCVKMSGEREDILLQVNHVRYKKNNGQLYLSQTRVGWMMDESDTFTVSVPYNDIRTQ
KISPEGKPKVQLQIVLHDISSYTFHFCTPEGRDKQVAERNQVKERLSQLMCQNRRQPPDE
LMEKKRMLDENEQLQHLYRALVPTSIISVDEFWKEIAGQYKQSMGPQQDVGVSGAFLADI
KPQTDGNNGKVQYNLTPEIMSAVFKTYPAVKKKHAEYVPHRMTESEFWTLFFQSHYYSVH
TTSRTENVFSECSKYDDREWNRDVTSIKNDPLYDLNDIYEEKPMSVDGELRVAGAKAGSN
IIHATMIKRFNQHSLNIIKAQTYSEKEKVLDELAAKNPNGIPNGEANQDVQVQKSKKAKL
EEKIVYHDLEDSNNVETSSLTIHQRDRYLTGPTEYTSIQNLQPHQVSTLHEQLSSSVARW
SPNLHNSQDPEAAYRSLQHFSEMCRKGRSSVGVRSGDQLPGNLHKELGQVYSSAGELLRH
FWSCFPPRTPQLQEKLHKMHETLCRYHSVTIRPFQEMAVNDYNCNSSILDHLIEMFNIAN
TKFENWKARNSR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatgttgtgttaaaatgagtggagagagagaagacattcttcttcaggtaaat
catgtgcgctacaagaaaaacaatggtcagttgtacctgtcacagacacgagttggatgg
atgatggacgagtcagatacattcactgtaagcgtcccctacaatgatatcagaactcaa
aaaatctcaccagagggtaagccaaaagttcaactccagatagttctccatgatatatct
tcttacacattccacttctgcacaccagagggcagggataaacaggtggctgagaggaac
caggtcaaggagcgcctcagtcagctgatgtgccagaacaggcggcaaccccctgatgaa
ttaatggaaaaaaaacgaatgttggatgagaatgaacaacttcagcatctgtatcgtgct
cttgttcctacatccattatctctgttgatgaattttggaaagagattgcaggacagtac
aaacagagtatgggaccacaacaagatgttggtgtgtcaggggcttttctggctgacata
aaacctcagactgatggtaataatggaaaagtacaatacaacttgactccggagattatg
tctgccgtgtttaaaacctacccagctgtaaaaaaaaagcatgcagaatatgtcccacat
aggatgacggagtcagagttctggactctcttttttcagtctcattattatagcgtccat
acaaccagcaggacggaaaatgtcttctctgaatgttcaaaatatgatgatagagaatgg
aatcgtgatgtcacctcaataaaaaatgatccattgtatgatttaaatgatatatatgaa
gaaaaacccatgtcagtggatggggagttaagggttgcaggtgctaaagctgggagtaac
atcattcatgccaccatgatcaaaaggtttaaccagcacagcctcaacattattaaagca
caaacttattctgaaaaggaaaaggtgttagatgaactagctgctaaaaacccaaatgga
attcccaatggtgaagcaaaccaggatgttcaagtacagaagagtaaaaaggctaagtta
gaagagaaaatagtttaccatgacctagaggattccaacaacgtggaaacatcttcatta
accatccaccagagagaccgctacctcacaggacctacggaatatacttccatccagaac
ctacagccacatcaggtctcaaccctacatgaacagctgtcatcttcagttgctaggtgg
tctccaaacttacacaacagccaggacccagaggctgcatatcgatccttacaacacttt
agtgaaatgtgtcgtaaaggaagatccagtgtaggagttcgttcaggggaccagttgcca
ggcaatttgcacaaggaattaggtcaggtttatagtagtgctggagaacttcttcgacat
ttctggtcatgctttccaccaagaactccacagttacaggaaaaattacacaagatgcat
gagacactttgtcgataccacagtgtaaccataagaccattccaggaaatggctgtaaat
gactataactgcaatagcagcattctagatcatcttatagaaatgtttaacattgccaat
accaagtttgaaaattggaaggcgcgaaactccaggtga
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