Panulirus ornatus (ornate spiny lobster): 139765255
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Entry
139765255 CDS
T10834
Symbol
Not10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-A
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139765255 (Not10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139765255 (Not10)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139765255 (Not10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_19
TPR_10
TPR_12
TPR_8
ANAPC3
TPR_16
TPR_1
SR-25
TPR_17
TPR_MalT
DUF7017
IMUP
ANAPC8
KIAA1549
DUF4692
Motif
Other DBs
NCBI-GeneID:
139765255
NCBI-ProteinID:
XP_071548692
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All DBs
Position
53:17772787..17848834
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AA seq
693 aa
AA seq
DB search
MAESKGSGEDSQETATTTETTNSSDTTDVEREWAQAAQAEFTKGNYAAALTLLSQLQGTR
PKDAKVLMNKAVVEYYRSDLKKTETFRKQLVDICTQCGIKIDEVGSADEVDRSVIHLNHC
VILYHLHQYRAALSLLEKMYTGLESLEESVGIGVCLLMTECHLGAHHPERALAVIDHTET
TFLPQPLPHTPSHKQPQPQEKENKSPEKGSITGGTGSSSSSSSSSSSSSSSSTSTTTDEI
RCSATQEQLRGKLQQLKVRALLMMRALRVAKKELKTIVTHAVTAGNSLAELEFLDYPPIT
YGPGLGVMYYNNLGVIHLGLGKPTVACLYLQKALQETQLVEESSSSQSGDWLSSRPLYQL
SSNVQPELYYNLGVTLLHMNKPDKAFDFLLEVLQVHSMNPRLWLRLAECCIAVHKSGLKD
DISAKRSIVQGTVGVGLHRKICLATCISDHNKKHCDPQSESDAAFPEPTLEFARLCLRNA
LTLLPDNVSTTSLTDEQEASGVMPELYPAGPSSPLRGTEVVSLRVSALACSAYVCLCLSD
YSTALRHAETLLVAHPKIPGVYKLLGHLYAGESLISLGKVSEAIAHFDPRLVGDVTLSPP
AQEANQSPPLNLPSQGCYPGTTATAMQVMRYNLSVAYTLRGELEKASNLLKEVWNESNGN
MPAQVIMLAMYIQLRMGHVDIMKNIVKNNILLT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtaagggcagtggtgaggattctcaagaaactgcaactacaacagagaca
accaacagttctgatacgacagatgttgagagggagtgggcccaggctgctcaggctgag
ttcacgaagggtaattatgctgctgctctcacacttctgagccagttgcaaggaacaaga
ccaaaggatgcaaaggtgctgatgaataaggctgtagttgagtactacaggagtgatctt
aagaaaacagaaaccttccgcaaacagttggttgatatttgcacgcaatgtggtatcaag
atagatgaagtaggctctgctgatgaggttgaccgaagtgtgatacatcttaatcactgt
gtcatattatatcaccttcaccagtatcgagcagcgctttctcttctggagaagatgtac
acaggcctagagtctttagaggaaagtgtgggtataggagtgtgtctgttaatgactgaa
tgccatttaggtgctcaccatccggagagagctcttgctgtcattgatcacacagaaact
actttcctaccccagcctctcccacatacgccctctcacaagcagccacaaccacaagaa
aaagagaataagtctcctgagaagggtagcataactggaggtactggcagcagcagtagc
agcagtagtagcagcagcagtagcagtagcagtagcacaagcacaactaccgatgaaatc
cgatgcagtgccacccaagaacagttaagaggaaagctacagcaactaaaagtacgggca
ttgcttatgatgagagcccttagggtagctaaaaaggaactcaagaccattgttacacat
gcagtcactgctggaaattctttggcagagttagaattcttagattatcccccaataacg
tatggtcctggtttaggagtgatgtactacaacaaccttggtgtaatacatcttggccta
gggaaacctaccgtagcttgtctatatctgcagaaggcccttcaagaaacacaattggta
gaagaatcaagctcatcacagtcaggtgattggttgtctagtcgtccactctatcagctt
agcagtaatgtacagccagaactttactacaatctgggtgtcacacttcttcacatgaac
aaaccagataaagcttttgattttctacttgaagttttacaagtgcactccatgaaccct
cgtctttggttaaggcttgcagagtgttgtatcgctgtgcataagtctggtctcaaggat
gatatcagtgcaaagaggtccatagtacagggaacagtgggagttggcttgcacaggaag
atttgccttgccacttgcatcagtgatcacaacaaaaagcactgtgatcctcagtcagaa
tctgatgctgcattcccagagcctacacttgagtttgcccgtctttgtcttcgcaatgct
cttactcttctgccagataatgtttcaacaacatcactgacagatgagcaggaagcttca
ggtgttatgccagaactttatcctgctggaccatcatctcccttgcgtgggactgaggtg
gtgagtctgcgagtatcagcgctggcatgtagtgcatatgtgtgtctttgtctctccgat
tactctacagccctcagacatgcagaaacactgctggtggctcatccaaaaatacctgga
gtttacaagcttttggggcatctgtatgctggtgaatctcttatatccctgggtaaagtt
tcggaggcgatagctcactttgatcctcgtcttgtgggagatgtgacgttatccccacct
gctcaagaggccaaccaaagtccgcctttaaatcttcccagtcaaggatgttacccaggg
accactgccacggctatgcaagtgatgcgctacaaccttagtgttgcttacacactacgt
ggagaattagaaaaagctagtaatttgctcaaagaagtgtggaatgaaagtaatggtaac
atgccagcgcaagtcatcatgctggctatgtacatacagttacgaatgggtcatgttgat
attatgaagaatattgttaagaacaatatattactaacctga
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