Panulirus ornatus (ornate spiny lobster): 139765297
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Entry
139765297 CDS
T10834
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139765297
09123 Folding, sorting and degradation
03018 RNA degradation
139765297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139765297
03041 Spliceosome [BR:
porn03041
]
139765297
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139765297
mRNA degradation factors
5'-3' decay
Lsm complex
139765297
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139765297
Complex C
U2 snRNP components
139765297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
139765297
NCBI-ProteinID:
XP_071548783
LinkDB
All DBs
Position
53:complement(19514257..19581852)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDTQLLQDAARREAQQQRQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcctttttcaagtctctaattgggaaggatgttgtggttgagctgaaa
aatgatttaagtatatgtggtacgctgcattcagtagaccaatacctcaacatcaagctt
acagatattaatgtaactgatactgagaaatacccccacatgttgtccgtaaagaactgc
tttatccgtgggtcagtggtccgatatgttcagttgccagtagatgaagtagacacacaa
cttctccaggatgcagcaagaagagaagcacaacagcagcgacaatag
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