Panulirus ornatus (ornate spiny lobster): 139765581
Help
Entry
139765581 CDS
T10834
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139765581 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139765581 (Sf3b3)
03041 Spliceosome [BR:
porn03041
]
139765581 (Sf3b3)
03036 Chromosome and associated proteins [BR:
porn03036
]
139765581 (Sf3b3)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139765581 (Sf3b3)
Spliceosome [BR:
porn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139765581 (Sf3b3)
Complex B
139765581 (Sf3b3)
Complex C
U2 SnRNP specific factors
139765581 (Sf3b3)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
139765581 (Sf3b3)
TFTC complex
139765581 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
139765581
NCBI-ProteinID:
XP_071549273
LinkDB
All DBs
Position
55:23985627..24052139
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
VIRSLMAFRLTGGNKDYVVVGSDSGRITILEYNQAKNQFERIHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHMVGVDVGFENP
LFACLEIDYEEADTDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT
PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRSEDQYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQVYPDGIRHIRADRRVNEWKAPG
KKTIVRCALNQRQVIIALTGGEIVYFEMDPTGQLNEYTERKEMKSDVICMAVGRVPAGEQ
RSRFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSIIEMGGQEGSDNEPRTLGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGNESVLAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE
YTPRKFVIHQESGHLVVIETDHNAYTEDTKRQRKMQMAEELREAAGEEEAEVAERMAEAL
LSEDLPDAVFGAPKAGPGMWASLIRIIEPIQGNTLHTIRLDQNEAAFSIALVKFANQSDM
DQQYLLVGTVKDYQLSPRQVDSGYIYCYKVVGDCTNLELVHRTEVEDIPTSICPYNGRVL
VGVGRLLRIYDLGKKKLLRKCENKHVANLIVDIKARGQRVFVSDVQESLFVLRYKRQENQ
LIIFVDDTNQRWVTTSCLLDYDTAAIADKFGNIAVVRLGSDINDDVDEDPTGNKALWDRG
LLNGASQKAEVIANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDPAKQRSISEDLDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttacaacttgacattgcagcgtgcgtcaggtatcacacatgctgtccatggg
aacttctcaggtactcgcactcaggagttggttgtgtctcgaggacgttcattagaactt
ctgaggcctgatcccaacacaggcaaggttcacaccatcttgacgacagacatatttgga
gtgatccgctctttgatggccttcagattaacaggcggtaataaagattatgttgttgtt
gggtctgattctggacgaatcaccatcctggagtacaaccaagccaaaaaccaatttgaa
agaattcacatggaaacttttggcaagagtggttgtcgacgaattgttcccggacagtac
cttgctattgatccaaaaggaagggcagtcatgattggagctgtagagaaacagaagctg
gtatatatcctgaatcgggatgctgcagctagacttaccatatcatcccccttggaggcc
cataaaagcaacacacttgtgtatcacatggttggagtggatgtgggatttgaaaaccca
ctgtttgcttgcttagaaatagactatgaggaagcagatactgatcctactggagaggct
gtgcataggacccaacagacactcaccttttatgaattggatcttggtcttaatcatgtt
gtcaggaaatatcatgagccactggaggagcatgcaaacttcctcatatctgtaccaggt
ggtaatgatggtccatctggtgtacttgtgtgctctgaaaactacattacttataagaac
ttgggtgatcagcctgacatccgttgcccaatccccaggagaaggaatgatcttgatgac
ccagaacgaggcatgattttcatctgtgctgcaactcacaagactcgttctatgttcttc
ttcttggctcagacagagcaaggagatattttcaaaattaccttagaaactgatgaagat
gttgtgacagagatcaaactcaaatattttgatacagtccctccagcaactgctatgtgt
gtcctgaagactggcttcctttttgttgcatcagaatttggcaatcattatctctatcag
attgcccatctaggtgatgatgatgatgagccagaattcagttcagccatgcctttagaa
gaaggagacacatttttctatgctcctagacagcttcagaatttagtgctggttgatgaa
cttgattcactgtcacccattatggcatgccagattgctgatttagccaatgaagataca
ccacagctgtatactgtgtgtgggcgaggcccacgatcatcattgcgagtactacgtcat
ggcttggaagtgagtgagatggcagtgtcagaactgcctggtaaccctactgctgtatgg
actgtcagaaaacgaagtgaagaccagtatgattcctacatcatcgtgtctttcgtcaat
gccacactggtactaagcattggagaaactgtagaggaagtgacggattctggcttcttg
ggcaccaccccaacattagcttgttctcagcttggtgatgatgctcttgtgcaggtttac
cctgatggcattcgacacatccgtgcagatcgtcgtgttaatgagtggaaagctcctggc
aaaaaaactatcgtaagatgtgctttgaaccaacggcaggttataatcgctcttactgga
ggagagatagtgtacttcgaaatggatccaacagggcaactgaatgaatatacagaaaga
aaggagatgaagagtgatgttatctgtatggcagttggtcgagtgccagctggagagcaa
cgatctcggttcttggctgttgggttatctgataatactgtcaggatcatcagccttgat
cctaacgactgtttgacagtacggggaatgcaagcgctgcctgctttaccagagtctcta
agcatcattgagatgggaggacaagagggatcagataatgaacctcgcactctaggtgcc
ttgtatctcaacattggtttgcagaatggtgtactgctacgtaccgtcttggactctgtg
actggtgacatgtctgatacacgtacacgttacttgggttcaaggcccgtcaaactcttt
cgtatcattatgcaaggaaatgagtctgtactggctatgtcatcacgttcatggctatcg
tactattaccagaacagattccacttgacaccattgtcatatgagagtctagaatatgca
gcagggttctcgtcagagcaatgtccggaaggcattgtagccatttccacaaacacactc
aggattttggctttagagaaacttggggcagtgtttaatcaggtgtctcaccctttagaa
tacactccacgcaagtttgtcatccatcaagaaagtggacacttggtagtaattgaaact
gatcacaatgcttatacagaagacactaaacgccagagaaaaatgcagatggcagaggaa
ttgagagaggcagctggagaagaggaagctgaggttgcagagaggatggcagaagctctg
ctctcagaggatctcccagatgctgtgtttggtgccccaaaagctggtcctggcatgtgg
gcttcacttattcgtattattgaacccatccagggtaatacacttcacactatcagatta
gaccagaatgaagcagccttcagcattgcattggtgaagtttgccaaccaaagtgacatg
gaccagcagtaccttttagttggcacagttaaagattaccagctgagtcctcgccaggtt
gacagtggttatatttactgctacaaagttgtaggtgactgtacaaatttggaacttgtt
catcgaacagaggttgaggacattcctacatcaatatgcccttacaatggtagagtgctt
gtgggagttggccgcttgttgagaatttatgatcttgggaagaaaaaactactaagaaaa
tgtgaaaataagcatgttgcaaacctgattgtggacatcaaagcaagaggacagcgagtc
tttgtaagtgatgttcaagagagtttgtttgttcttcggtacaaacgacaagagaaccag
ttaataatatttgttgatgataccaaccagcgctgggtcaccacttcttgcctcctggac
tatgatacagctgcaatagcagacaaattcggtaacattgctgtggtacggttaggcagt
gacattaatgatgatgttgatgaagatccaactggtaacaaagcattgtgggatcgcgga
ctccttaatggtgcttcacagaaggcagaagtgatagccaacttccatgttggagagaca
gttaatacacttgagaaagcaactttgattcctgggggcagtgaatctttagtgtatacc
actttgagtgggacagtaggagtgctggtgccatttacatctcgagaggatcatgagctt
ttccagaatctggagatgcacatgcgttctgaacatccgcctctttgtggacgagaccat
ctctccttccggtcatacttcttccctgtcaagaatgtcattgatggggacttatgtgaa
cagttcaacatggtagaccctgctaaacaacgcagtatctctgaagatttagacaagacc
ccaaatgagctgtccaagagattagaagatataagaactcgctatgccttctaa
DBGET
integrated database retrieval system
