Panulirus ornatus (ornate spiny lobster): 139765813
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Entry
139765813 CDS
T10834
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030
DNA replication
porn03410
Base excision repair
porn03420
Nucleotide excision repair
porn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139765813 (DNAlig1)
03410 Base excision repair
139765813 (DNAlig1)
03420 Nucleotide excision repair
139765813 (DNAlig1)
03430 Mismatch repair
139765813 (DNAlig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139765813 (DNAlig1)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139765813 (DNAlig1)
Enzymes [BR:
porn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139765813 (DNAlig1)
6.5.1.6 DNA ligase (ATP or NAD+)
139765813 (DNAlig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
139765813 (DNAlig1)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
139765813 (DNAlig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
139765813 (DNAlig1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
139765813 (DNAlig1)
NER (nucleotide excision repair)
Other NER factors
139765813 (DNAlig1)
MMR (mismatch excision repair)
Other MMR factors
139765813 (DNAlig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
139765813
NCBI-ProteinID:
XP_071549709
LinkDB
All DBs
Position
56:complement(1206489..1298516)
Genome browser
AA seq
1154 aa
AA seq
DB search
MVQKTILSFFSATKPKDPEGASVGRSRGKNDENKDSANLDDSPVKRSKHHKTRVIESDSE
EEQEPSTSSHKSDEEKENKKRNSPLKNTCKEEKEKDHDMKQAAPDKKNLDTKAKQKGSNK
KNETKKPGKKTTVKKSIKKQKDESGKQKKSPSSKNGKRKDAGEDENDNDVKKEPEKSDED
RLEDENQDTEDENDKVANMEVKSCTEEEKMETEEEGELVHTDVDEDQEENAVKKDDSVEE
DNAEPAKCGESSPGPSKSSAFTTPEKSALSSEGSPGFTPETVPPLRKTARKQMKRKSDCL
ENKQRHMIKKLKEEKETINVSDEENNGSVDLKSDLENEETNSLENDDSKTTIKKDEVGME
IDSSEEGDVEDKCQSHSKEKIVQGRPKPTAISSFFSPRTSAKKSPASKSPKDENVSSFKK
SSNATKKGKKNSPCSSSKGDVTDKDESEENNSSPQKKDTSQKDEGSPNKGMPTKLSDAVK
KKPLINPFSKTSGAVKASGADYDPAKDNYHPVEDAFWGRSERVPYLALAKTMEHIEKTSG
RLKTIKILANFFRSVIILSPSDLLQCVYLCLNKVAPAYEGVELGIGGMILMRTIAQATGR
SLEKIKFDAEEKGDLGLVAEQSRSNQRIMFQPAKLTVPGVFDKLKEIAVMTGNASQSRKI
DKIKGMFVACRFSEARYLIRSLGGKLRIGLAEQSVLQAIAQACFLSPPGQEYPPEVIDAG
KGMASDKLKAQLENYGLILKTTYCEFPSYDKIIPVLLEEGLEELPNRCQLTPGIPLKPML
AHPTSGVSEVLKRFENAKFTCEFKYDGERAQIHLKEDGTINIYSRNQEDNTTKYPDIIAR
FKNSLGEKVKSCVIDSEAVAWDPEKKQILPFQVLSTRKRKDASESDIKVQVCVFPFDLLY
LNNKPLVREPFEERRALLRENFKEVEGEFVFAKSMDSANTEDIEEFLEESIKGNCEGLMV
KTLAVDATYEIAKRSHNWLKLKKDYLDGVGDTIDVVVIGGYVGRGKRTGQYGGFLLACYD
PDNEEYQTLCKIGTGFTEEALQKHTAFFKEHIIDKPKSYYRYENSIAPDYWFEPVQVWEI
KCADLSISPVHKAAAGIADPEKGISLRFPRFLRIRDDKTTEEATSAAQIADLYNSQDQIK
NSKLPENTADEEFY
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaagactattttgtcctttttctcagccaccaaacccaaagatccagaagga
gcatctgtgggcaggtcacggggaaaaaatgatgaaaacaaagattctgctaacctagat
gattctcctgtcaaaagatccaagcatcataaaacaagggtaattgagagtgacagtgag
gaagaacaggagccatctactagttcccataaatctgatgaagaaaaagaaaataaaaaa
agaaatagtccacttaagaacacatgtaaagaagagaaagagaaagatcatgacatgaag
caggctgctcctgacaagaagaatttagatactaaagcaaaacaaaaaggtagtaacaaa
aagaatgaaacaaagaagccaggaaaaaaaacaactgtaaaaaagagcattaaaaagcaa
aaagatgaatcaggaaagcaaaagaagagtccatcatcaaagaatggtaagagaaaagat
gcaggtgaagatgaaaatgataatgatgtgaaaaaagaacctgagaaatcagatgaagat
agactagaggatgaaaaccaggatacagaggacgagaatgataaagtagccaatatggaa
gtgaaatcttgtacagaagaagagaaaatggagacagaagaggaaggagaattggtccac
actgatgtggatgaagaccaagaggaaaatgcagtgaagaaagatgactcagtagaggaa
gataatgcagagccagcaaaatgtggagaatcaagtccaggaccatcaaaatcctctgcc
ttcactacaccagagaaatcagccttatcttcagaaggttctccaggtttcacacctgag
acagttccacctttgaggaagacagctaggaaacaaatgaaacggaagagtgattgctta
gagaacaagcaaagacatatgataaagaagttgaaagaagagaaagagaccatcaatgta
tcagacgaagaaaacaatggaagtgttgacttgaaatcagacctggaaaatgaagagaca
aactctttagaaaatgatgacagcaaaacaaccataaagaaggatgaagtaggaatggag
atagacagctctgaagaaggtgatgtagaagacaagtgtcagagccacagtaaagagaag
atagtacaaggcaggcccaagccaacagctatatccagctttttctctcctagaacttca
gctaaaaagtcaccagcctccaaatctcccaaagatgagaatgtgtcatctttcaagaaa
tcttccaatgccactaaaaaagggaaaaaaaatagcccatgctcatcctctaagggtgat
gtgactgacaaagatgaatcagaagaaaataactcctctccccagaagaaagatacttct
caaaaagatgaagggtctccaaacaaaggaatgccaaccaaactttctgatgcagtgaaa
aagaaaccactaataaatccgttttccaaaacttctggagctgtcaaagcttctggtgct
gattatgaccctgctaaggataactatcatccagttgaggatgccttttggggcagatca
gaaagagtaccttaccttgctttggcaaaaacaatggaacatattgagaaaactagtggc
cggttgaagaccatcaagattctggctaatttctttcgttcagtgataattttatcacct
agtgaccttttgcagtgtgtatacctatgtctcaacaaagttgcaccagcgtatgaaggt
gttgaactgggtattggaggtatgattttgatgcgcacaatagctcaggctactggaaga
agccttgaaaagataaagtttgatgcagaggaaaaaggagatttaggacttgtggcagaa
caatcacgatccaaccaaagaatcatgttccagcctgcaaaattaacagtcccaggggtg
tttgacaaactgaaggagattgcagttatgactggcaatgcttcacaaagcaggaaaatt
gacaagatcaagggaatgtttgtggcatgtcgcttttctgaggcaagatatctcattcga
tctctaggtggaaagctgcgcattggtttagctgagcagtctgtcctccaagcaatagct
caggcgtgtttcctatctccccctggccaagagtatccaccagaggtcattgatgctggt
aaggggatggcatcagacaagttgaaggcacaattagagaactatggccttattttgaag
acaacatattgtgagttcccatcttatgacaagattataccagttctcttggaggagggt
cttgaagagctcccaaatcgatgtcagctaacgccaggtattccattgaaacctatgtta
gcacatcctacttcaggggtttcagaagtcctcaaacgttttgaaaatgccaaattcact
tgtgaattcaaatatgatggggaaagagcacagatccatttaaaggaggatggtactatc
aacatctacagtaggaatcaggaggacaatactacaaaatatccagatatcattgcacga
ttcaagaattcacttggggagaaggtcaaatcatgtgttattgactcagaagctgtggca
tgggatccggaaaaaaagcagattcttcccttccaagtacttagtacaagaaagaggaaa
gatgctagtgaaagtgatatcaaggtacaagtctgtgttttcccttttgacttgctctac
cttaacaataagcctttggtgcgtgaaccttttgaggaacgtagagctcttctgcgagaa
aatttcaaggaagtagaaggagaatttgtgtttgccaaaagcatggactctgcaaacact
gaagacattgaagagttcttggaagaatctattaaaggaaactgtgaaggccttatggtt
aaaacccttgctgttgatgccacatatgagatagcaaaacgttcacataattggctgaag
ctgaagaaagactatcttgatggggtgggagatacaatagatgttgtggtgatcggagga
tatgtgggaagagggaagcgtactggacagtatggaggcttcctcttagcctgttatgat
ccagataatgaagaataccaaacactttgcaagattgggacaggcttcacagaagaagct
cttcaaaaacatacagcattcttcaaggaacatattatagacaaaccaaaatcatattac
agatatgaaaacagtattgccccagattattggtttgaacctgtacaagtgtgggagatt
aagtgtgctgatctttcaatatcaccagttcacaaggctgctgcaggaattgctgaccca
gaaaaaggcatatctctcagattcccaagatttttgcgtatcagagatgacaaaactaca
gaggaagccacaagtgcagctcagattgctgatctgtacaatagtcaggatcaaataaag
aacagtaaattacctgaaaatactgcagatgaagaattttattga
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