KEGG   Panulirus ornatus (ornate spiny lobster): 139765813
Entry
139765813         CDS       T10834                                 
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030  DNA replication
porn03410  Base excision repair
porn03420  Nucleotide excision repair
porn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139765813 (DNAlig1)
   03410 Base excision repair
    139765813 (DNAlig1)
   03420 Nucleotide excision repair
    139765813 (DNAlig1)
   03430 Mismatch repair
    139765813 (DNAlig1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:porn03032]
    139765813 (DNAlig1)
   03400 DNA repair and recombination proteins [BR:porn03400]
    139765813 (DNAlig1)
Enzymes [BR:porn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     139765813 (DNAlig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     139765813 (DNAlig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     139765813 (DNAlig1)
DNA replication proteins [BR:porn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139765813 (DNAlig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     139765813 (DNAlig1)
DNA repair and recombination proteins [BR:porn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     139765813 (DNAlig1)
   NER (nucleotide excision repair)
    Other NER factors
     139765813 (DNAlig1)
   MMR (mismatch excision repair)
    Other MMR factors
     139765813 (DNAlig1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 139765813
NCBI-ProteinID: XP_071549709
LinkDB
Position
56:complement(1206489..1298516)
AA seq 1154 aa
MVQKTILSFFSATKPKDPEGASVGRSRGKNDENKDSANLDDSPVKRSKHHKTRVIESDSE
EEQEPSTSSHKSDEEKENKKRNSPLKNTCKEEKEKDHDMKQAAPDKKNLDTKAKQKGSNK
KNETKKPGKKTTVKKSIKKQKDESGKQKKSPSSKNGKRKDAGEDENDNDVKKEPEKSDED
RLEDENQDTEDENDKVANMEVKSCTEEEKMETEEEGELVHTDVDEDQEENAVKKDDSVEE
DNAEPAKCGESSPGPSKSSAFTTPEKSALSSEGSPGFTPETVPPLRKTARKQMKRKSDCL
ENKQRHMIKKLKEEKETINVSDEENNGSVDLKSDLENEETNSLENDDSKTTIKKDEVGME
IDSSEEGDVEDKCQSHSKEKIVQGRPKPTAISSFFSPRTSAKKSPASKSPKDENVSSFKK
SSNATKKGKKNSPCSSSKGDVTDKDESEENNSSPQKKDTSQKDEGSPNKGMPTKLSDAVK
KKPLINPFSKTSGAVKASGADYDPAKDNYHPVEDAFWGRSERVPYLALAKTMEHIEKTSG
RLKTIKILANFFRSVIILSPSDLLQCVYLCLNKVAPAYEGVELGIGGMILMRTIAQATGR
SLEKIKFDAEEKGDLGLVAEQSRSNQRIMFQPAKLTVPGVFDKLKEIAVMTGNASQSRKI
DKIKGMFVACRFSEARYLIRSLGGKLRIGLAEQSVLQAIAQACFLSPPGQEYPPEVIDAG
KGMASDKLKAQLENYGLILKTTYCEFPSYDKIIPVLLEEGLEELPNRCQLTPGIPLKPML
AHPTSGVSEVLKRFENAKFTCEFKYDGERAQIHLKEDGTINIYSRNQEDNTTKYPDIIAR
FKNSLGEKVKSCVIDSEAVAWDPEKKQILPFQVLSTRKRKDASESDIKVQVCVFPFDLLY
LNNKPLVREPFEERRALLRENFKEVEGEFVFAKSMDSANTEDIEEFLEESIKGNCEGLMV
KTLAVDATYEIAKRSHNWLKLKKDYLDGVGDTIDVVVIGGYVGRGKRTGQYGGFLLACYD
PDNEEYQTLCKIGTGFTEEALQKHTAFFKEHIIDKPKSYYRYENSIAPDYWFEPVQVWEI
KCADLSISPVHKAAAGIADPEKGISLRFPRFLRIRDDKTTEEATSAAQIADLYNSQDQIK
NSKLPENTADEEFY
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggttcaaaagactattttgtcctttttctcagccaccaaacccaaagatccagaagga
gcatctgtgggcaggtcacggggaaaaaatgatgaaaacaaagattctgctaacctagat
gattctcctgtcaaaagatccaagcatcataaaacaagggtaattgagagtgacagtgag
gaagaacaggagccatctactagttcccataaatctgatgaagaaaaagaaaataaaaaa
agaaatagtccacttaagaacacatgtaaagaagagaaagagaaagatcatgacatgaag
caggctgctcctgacaagaagaatttagatactaaagcaaaacaaaaaggtagtaacaaa
aagaatgaaacaaagaagccaggaaaaaaaacaactgtaaaaaagagcattaaaaagcaa
aaagatgaatcaggaaagcaaaagaagagtccatcatcaaagaatggtaagagaaaagat
gcaggtgaagatgaaaatgataatgatgtgaaaaaagaacctgagaaatcagatgaagat
agactagaggatgaaaaccaggatacagaggacgagaatgataaagtagccaatatggaa
gtgaaatcttgtacagaagaagagaaaatggagacagaagaggaaggagaattggtccac
actgatgtggatgaagaccaagaggaaaatgcagtgaagaaagatgactcagtagaggaa
gataatgcagagccagcaaaatgtggagaatcaagtccaggaccatcaaaatcctctgcc
ttcactacaccagagaaatcagccttatcttcagaaggttctccaggtttcacacctgag
acagttccacctttgaggaagacagctaggaaacaaatgaaacggaagagtgattgctta
gagaacaagcaaagacatatgataaagaagttgaaagaagagaaagagaccatcaatgta
tcagacgaagaaaacaatggaagtgttgacttgaaatcagacctggaaaatgaagagaca
aactctttagaaaatgatgacagcaaaacaaccataaagaaggatgaagtaggaatggag
atagacagctctgaagaaggtgatgtagaagacaagtgtcagagccacagtaaagagaag
atagtacaaggcaggcccaagccaacagctatatccagctttttctctcctagaacttca
gctaaaaagtcaccagcctccaaatctcccaaagatgagaatgtgtcatctttcaagaaa
tcttccaatgccactaaaaaagggaaaaaaaatagcccatgctcatcctctaagggtgat
gtgactgacaaagatgaatcagaagaaaataactcctctccccagaagaaagatacttct
caaaaagatgaagggtctccaaacaaaggaatgccaaccaaactttctgatgcagtgaaa
aagaaaccactaataaatccgttttccaaaacttctggagctgtcaaagcttctggtgct
gattatgaccctgctaaggataactatcatccagttgaggatgccttttggggcagatca
gaaagagtaccttaccttgctttggcaaaaacaatggaacatattgagaaaactagtggc
cggttgaagaccatcaagattctggctaatttctttcgttcagtgataattttatcacct
agtgaccttttgcagtgtgtatacctatgtctcaacaaagttgcaccagcgtatgaaggt
gttgaactgggtattggaggtatgattttgatgcgcacaatagctcaggctactggaaga
agccttgaaaagataaagtttgatgcagaggaaaaaggagatttaggacttgtggcagaa
caatcacgatccaaccaaagaatcatgttccagcctgcaaaattaacagtcccaggggtg
tttgacaaactgaaggagattgcagttatgactggcaatgcttcacaaagcaggaaaatt
gacaagatcaagggaatgtttgtggcatgtcgcttttctgaggcaagatatctcattcga
tctctaggtggaaagctgcgcattggtttagctgagcagtctgtcctccaagcaatagct
caggcgtgtttcctatctccccctggccaagagtatccaccagaggtcattgatgctggt
aaggggatggcatcagacaagttgaaggcacaattagagaactatggccttattttgaag
acaacatattgtgagttcccatcttatgacaagattataccagttctcttggaggagggt
cttgaagagctcccaaatcgatgtcagctaacgccaggtattccattgaaacctatgtta
gcacatcctacttcaggggtttcagaagtcctcaaacgttttgaaaatgccaaattcact
tgtgaattcaaatatgatggggaaagagcacagatccatttaaaggaggatggtactatc
aacatctacagtaggaatcaggaggacaatactacaaaatatccagatatcattgcacga
ttcaagaattcacttggggagaaggtcaaatcatgtgttattgactcagaagctgtggca
tgggatccggaaaaaaagcagattcttcccttccaagtacttagtacaagaaagaggaaa
gatgctagtgaaagtgatatcaaggtacaagtctgtgttttcccttttgacttgctctac
cttaacaataagcctttggtgcgtgaaccttttgaggaacgtagagctcttctgcgagaa
aatttcaaggaagtagaaggagaatttgtgtttgccaaaagcatggactctgcaaacact
gaagacattgaagagttcttggaagaatctattaaaggaaactgtgaaggccttatggtt
aaaacccttgctgttgatgccacatatgagatagcaaaacgttcacataattggctgaag
ctgaagaaagactatcttgatggggtgggagatacaatagatgttgtggtgatcggagga
tatgtgggaagagggaagcgtactggacagtatggaggcttcctcttagcctgttatgat
ccagataatgaagaataccaaacactttgcaagattgggacaggcttcacagaagaagct
cttcaaaaacatacagcattcttcaaggaacatattatagacaaaccaaaatcatattac
agatatgaaaacagtattgccccagattattggtttgaacctgtacaagtgtgggagatt
aagtgtgctgatctttcaatatcaccagttcacaaggctgctgcaggaattgctgaccca
gaaaaaggcatatctctcagattcccaagatttttgcgtatcagagatgacaaaactaca
gaggaagccacaagtgcagctcagattgctgatctgtacaatagtcaggatcaaataaag
aacagtaaattacctgaaaatactgcagatgaagaattttattga

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