Panulirus ornatus (ornate spiny lobster): 139765838
Help
Entry
139765838 CDS
T10834
Name
(RefSeq) patched domain-containing protein 3-like
KO
K12385
Niemann-Pick C1 protein
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
porn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139765838
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139765838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
porn02000
]
139765838
Transporters [BR:
porn02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
139765838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
DUF5693
Motif
Other DBs
NCBI-GeneID:
139765838
NCBI-ProteinID:
XP_071549762
LinkDB
All DBs
Position
56:complement(3656367..3694439)
Genome browser
AA seq
1039 aa
AA seq
DB search
MCNHKNSTTAKSKAGASDERSPAGVVEEGGVALSTDQDATQPARWTASEGHTIVETDNSD
GVKVASETPPASVDAERRSNDHKTTPAASGKKKQQSCLAEASAWATRTLENTFERHGRRV
AGHPRTTAVLCLVGSALLALGSLNFTTELRPYRLWIPQDSEFIKVMNWQAENFPSEYRRH
MVVWEAENVLTARSVKEMWRLHTRVRELSAGPNGTTWESLCARVPSLPMEEENPQDIDYD
EFDYGTLVFRRRRDVLQDPEEDLSLMLPRDQYCNSLSTLPKVCLETSLLEVWGLNEELIM
SLTDEQVLEDVNSARLSEVFGYKVNFTNYLGGITYNETGEVVGAKAATHIWVSLVDTLAV
SLGDSVVDQGSGDLVDTAGFAWENAWVTTVLNDTSRPPDIRVYAHAASSFGTVSDDNIWG
DVKWLVVGFSLMSIFVNITLGKRNLVQQRPMLAFLGMVSVGQAVAVSYGVCSLFGVPYCP
VNSILPILLMGLGVDDMFVIMAAWEAAGRHKTSSGCLVDRAGRTMRHAGVAITVTSLTDV
TAFAVGASTDLPALRSFCLYAAVGILAVYVMQATFFLAWLVRDEKRMEENKNGFLWCVTH
RDWKPWRCSDRDLMADAFKHGFCRFILSAPVRVFVLIGSGCLLASSAWATMNLHQEFNPM
WFIPRSSYLYEAFEASNKYFPEAGERGYVYFANISLPDDLPKLNRFADALTANDAVSSVD
AWFTALNDYISQKPELENTTLTYSMLQDTLSVFLQSSSGAAYRGDFIIDGDLDCHYPAPP
ITSFRIGITHRPAKSPAEQSAALKTVKSLVASIPVQGYKAAWAQAYSIWETNEVIGYELW
RNIILAGLVVGIVTLVLLASFVGAMLVLGCVGATLVGISGAMWLWGLTVDTVSCIALVLA
IGLSVDYAAHVAHAFLAARDVKDTTERARAALETVGPAVLQGGLSTLLSFVLLAGSSSHV
FMTFKVFTAASVLGLYYGLVLLPVVLSLTGPDAYDDFQTSDPTLRTDPGTVGVSQHPQAY
MNSAFSPDHDITTKEASLP
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaccacaagaactccacgacggcgaagagcaaggcaggcgcgagcgacgagcgc
tcgcccgcgggggtggtggaggagggcggcgtcgccctgagcacggaccaggacgccacg
cagccagccaggtggacggcgtccgagggccacaccatcgtagagacggacaactcggac
ggcgttaaagtcgccagcgagacgccgccagcctccgtcgacgccgagcgacgcagcaat
gaccacaagacgaccccagccgccagcggcaagaaaaagcaacagtcctgcctggccgag
gcgagcgcctgggcgacgcggacgctggagaacaccttcgagcggcacggccgccgggtg
gctggccacccgcgcaccaccgccgtcctctgcctcgtcgggtccgcgctcctggccctg
ggctccctcaacttcaccacagagctcaggccctaccgcctctggatcccacaagactca
gaattcatcaaggtgatgaactggcaagcagagaacttccccagcgagtaccgacgccac
atggtcgtgtgggaggcagagaacgtgctgacggcgaggtcggtgaaggagatgtggcgc
ctccatacccgcgtcagggaactctccgctgggcccaatggcaccacttgggagtccctg
tgcgcccgcgtcccgtcgctgcccatggaggaggaaaacccacaagacatcgactacgac
gagttcgactatggcaccctcgttttccggcggcgccgtgacgtccttcaagacccagag
gaagacctgagcctaatgctgcccagagaccagtactgcaatagcttgagcaccctgccc
aaggtctgcctggagacgagcctcctcgaagtctggggtctgaacgaagagctgatcatg
agtctgacggacgagcaggtgttggaagacgtcaactcagcgcgactgagcgaagtcttc
ggctacaaagtgaacttcaccaattacctgggcggcatcacgtacaatgagacgggagag
gtggtcggggccaaggctgccacgcatatctgggtgtcgctcgtggacacgttggctgtt
agcctgggagactccgtcgtggaccagggcagcggcgacctagtggacacggctggattt
gcctgggagaacgcctgggtgacgaccgttttgaacgacacgtcgcgaccgccggacatc
cgcgtgtacgcccacgccgccagcagcttcggcaccgtcagcgacgacaacatctggggc
gacgtgaagtggctggtcgtcggcttctcgctcatgagcatcttcgtgaacataacgctg
gggaagaggaacctcgtgcaacagcgtcccatgctcgccttcttagggatggtgagcgtc
gggcaggcagtggccgtgtcgtacggcgtgtgctccctcttcggcgtcccctactgcccc
gtcaactctattctgcccatcctcctgatggggctgggcgtggacgacatgttcgtcatt
atggcagcgtgggaggcggccgggcgtcacaagaccagttcgggatgcctcgtcgaccgt
gccggtcgaaccatgcgtcacgcaggggtggccatcaccgtcacgtcgctgacggacgtc
accgcgtttgctgtgggcgcgtccacagacctgccggccctgaggtcgttctgcctgtac
gctgccgtgggcatcctcgcggtgtacgtgatgcaagccaccttcttcctggcgtggctg
gtgcgcgacgagaagcggatggaggagaacaagaacggcttcctgtggtgcgtgacccat
cgcgactggaagccgtggagatgcagtgacagggacctgatggcagatgccttcaagcac
ggcttctgtcgcttcattctcagcgcaccggtccgcgtcttcgtcctcattggctcgggc
tgcctcctggcttcgtcggcatgggccaccatgaacctccaccaagaattcaaccctatg
tggttcatacccaggtcctcttacctctacgaagcatttgaggcctcgaacaaatacttc
cccgaggcaggagagaggggctatgtctacttcgccaacatctccttgccagacgacctg
ccgaagttaaaccgcttcgcagatgcgctcaccgcgaacgacgcggtcagctccgtcgac
gcctggttcacggcgctcaatgactacatatcccagaagccagagctagagaacacgacc
ctcacgtactccatgctgcaggacaccctctccgtcttccttcagtcctcctccggcgct
gcgtacaggggcgacttcatcatcgacggggacctcgactgccactacccagctccccca
atcacctccttcaggatcggcatcacccaccggcctgcaaagtcaccagctgagcaatcg
gctgccctgaagacggtcaagtccttggtggccagcatcccagtccaaggctacaaggcg
gcgtgggctcaagcctacagcatctgggaaaccaatgaggtgatcggctacgagctgtgg
aggaacatcatcttggccgggctggtggtgggcatagtgaccctagtgctgctggcttcg
ttcgtcggggccatgttggtcctggggtgcgtcggcgcgaccctagtggggatctctggc
gccatgtggctgtgggggctcaccgtggacacggtttcctgcatcgcgctcgttctggcc
attgggctgagcgtcgactacgccgcgcatgtggcgcacgccttcctggccgcgcgagac
gtcaaggacacgaccgagagggcgcgagccgccctggaaaccgtgggtcccgccgtcctg
caaggcggactctcgaccctcctctctttcgtcctcctggcaggttcctcctcgcacgtc
ttcatgaccttcaaagtgttcacggcagcctccgtgctcggcctctactatggactcgtc
ttgcttcccgtggtgctctccttgacgggtccagacgcgtatgacgacttccagacgtca
gacccgacccttcgaacggacccaggcactgtgggtgtgtcacagcacccgcaggcgtac
atgaactctgccttctccccagaccatgatatcacgaccaaagaagcttctttgccatga
DBGET
integrated database retrieval system
