Panulirus ornatus (ornate spiny lobster): 139766000
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Entry
139766000 CDS
T10834
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139766000 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139766000 (Taf5)
03036 Chromosome and associated proteins [BR:
porn03036
]
139766000 (Taf5)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139766000 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
139766000 (Taf5)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139766000 (Taf5)
STAGA complex
139766000 (Taf5)
TFTC complex
139766000 (Taf5)
SAGA complex
139766000 (Taf5)
SLIK complex
139766000 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Cytochrom_D1
eIF2A
WDR54
Dsl1_N
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
139766000
NCBI-ProteinID:
XP_071550151
LinkDB
All DBs
Position
56:complement(21286385..21312395)
Genome browser
AA seq
742 aa
AA seq
DB search
MSDAGGPTYASLTPANPTIINGLAGVDLQTGQQLTTHQAVMNNTDHTMVNVVNTVGVAGA
GMQTVPSQNLATVMPAVNHQQPVPDVKTETMGDHAASVDRNTLVAVLQFLKKNNMKRTEE
LLRQESNFYEKVEEAKQGLGGDAEVSSVLSAYKSEGDPAEYEDAYKSLQAFIEKSLDAYK
HEASLVLYPVFVHMYLELVYNGHEEVAKSFLEKLGNMQEDYYREDIHKLSLVTSRDHMTG
YQIMDNFRSSQFTVRMSRDTYSHLKRYLTECGGGPVPRIIHDRLYLDVYEGVPRTRTQVL
ATAGAQEGEAPKQVNKSKIFYGLLKEPELPSLAMEEEEGEEEGDKPKKKKPKKDALQKSK
KNDPNAPPSNRIPLPELRDIDKMEKAKAFRDALKRVTLTKDTLPSICFYTFLNASGNVTA
VDISDDSSLLAYGTADSQIRVQSITPSKLRCMKSAEQLNDIDKESDDVLVRMMDDRTAEP
VRTLLGHSGPVYACCFSPDRNLLLTCGEDGTIRLWSLQTWTCLVVYKGHVFAVWDVCFAP
YGYYFASGGHDRTGRLWATDHHQPLRIFAGHFSDVDVVQFHPNSNYVATGSSDRSIRIWD
ALNGNCVRVLTGHKDVIDALAFSPCGRFLASAGGDKRVLVWDLAQGHLIAEMVSHTSTIY
TIAFSRDCNVLASGGMDNCVKLWDFSRVLEDNHEDDINVSNNPDVKRNESLLLGSFPTKY
TPVLATHFTRRNVLLAAGPYDG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcgggagggcctacatacgccagtttgactcctgctaaccccactattatt
aatgggctggctggggtggaccttcagacgggtcagcagttgacaacgcaccaagcggtg
atgaacaacacggatcacacgatggtgaacgtggtgaacacggtgggagtagcaggggca
ggaatgcaaactgtcccctcgcaaaatttggccacagtaatgccggccgttaatcaccag
caacctgtcccagatgtaaaaactgagacaatgggggatcatgccgcatccgttgataga
aacacacttgtggctgtgttgcagtttctgaagaaaaataacatgaagagaactgaagaa
cttttaaggcaagagtcaaatttttatgagaaggtggaagaagcaaaacaaggccttggt
ggtgatgctgaggtttcaagtgtcctttcagcctacaagagtgaaggtgacccagcagag
tatgaagatgcatacaaaagtctccaggcatttattgagaaaagtttggatgcttacaag
catgaagcctctttagtgctgtacccagtttttgtacatatgtatttagaactagtgtac
aacggtcatgaggaggttgccaaatcatttttagagaaactaggtaacatgcaagaagac
tactaccgtgaagatatacacaagctttcattggtgacatcacgggaccacatgacagga
tatcagatcatggataactttagatcgagccagttcacggtgagaatgtccagggataca
tattcacacttgaagcggtaccttacagagtgtggtgggggaccagtgccaaggattatt
catgacagattgtatttggatgtttatgaaggtgtacctcgtactcgtacacaggtcctg
gcaactgcaggagcacaagaaggagaggcgccaaaacaagttaacaaatccaagattttt
tatggactactgaaggaacctgaactacctagccttgcaatggaagaagaagagggagag
gaggaaggagataagccaaagaagaagaagcccaaaaaagatgcacttcaaaagagtaag
aagaatgatcctaatgctccacccagcaatagaattccattaccagaattgcgtgatatt
gataaaatggaaaaggcaaaagcattcagagatgccctgaagagagtgacgttaaccaag
gacacccttccatcaatatgcttttacacctttctaaatgcttctggaaatgttacagcg
gtagacatatctgatgactccagtcttcttgcctatggtacagcagactcacaaatccga
gtacagagcatcacacccagcaaactacgatgcatgaagtctgcagagcagttgaatgac
attgataaagaatctgatgatgttctagtgcgtatgatggatgacaggacagcagaacca
gttcgtactctccttggccattctggaccagtctatgcctgctgcttcagtcctgaccgt
aacttgcttctcacttgtggagaggatggcacaattcgtttatggagtctacagacatgg
acgtgcttagttgtttacaaaggacacgtatttgctgtatgggacgtttgttttgcacct
tatggttactactttgcttctggtggtcatgatcgaactggtagattgtgggcaacagat
caccatcagccacttagaatatttgctggacatttctctgatgttgatgttgtacagttc
catccaaatagcaactatgtagcgacaggatcgagtgatcgcagtattcgaatttgggat
gcacttaatggaaattgtgtaagagttctaacaggtcataaggatgtaatcgatgccttg
gcattttctccctgtggacgcttcttagcatctgctggtggtgataaacgtgttttagta
tgggacttggcgcaagggcatcttattgcagaaatggtttcacacacttcaacaatctat
accattgcattttcaagagactgtaatgttcttgcttctggagggatggataattgtgtg
aagctctgggatttcagtcgtgttcttgaggataatcatgaagatgacataaatgtttct
aacaacccagatgtcaaacgcaatgaatctttactacttggctcatttcctacaaaatat
acacctgtgcttgcaacacacttcacaagaagaaatgtgttgttggctgctggaccgtac
gatgggtga
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