KEGG   Panulirus ornatus (ornate spiny lobster): 139766213
Entry
139766213         CDS       T10834                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03420  Nucleotide excision repair
porn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139766213
  09124 Replication and repair
   03420 Nucleotide excision repair
    139766213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:porn04121]
    139766213
   03400 DNA repair and recombination proteins [BR:porn03400]
    139766213
Ubiquitin system [BR:porn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     139766213
DNA repair and recombination proteins [BR:porn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      139766213
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 WD_LRWD1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_SCAP
Other DBs
NCBI-GeneID: 139766213
NCBI-ProteinID: XP_071550624
LinkDB
Position
4:50235729..50373157
AA seq 438 aa
MLREDFSDLPELQLWGFKPSDVNLGTVKNLEKVRLGQLSSWRYRSHVKTCLAASHTLSDV
TLEEKEQFPNAFVTHADLECVDFRYLLCGLSSGGVAIYDTSSIKKGRTFSEVASVKGCRR
GSHKYQVDCVQWYPADTGLFVTSSQDKKVKIWDPNHMKPVDQFSIDCHILHHHMSPVAFK
HSLLSVAGDTGEVILCDLRSGSSTHHLQGHDGAVQVTQWSPRNQYILLSGGRDHTVRVWD
VRAGHACLRALDMNNSPPESSRFKKKMKKIPEAHKSRVTSLCFTHDGSWLLSFSYDGDLK
LWNTDTWKNMNIDYGETYTELKKNLRMAVSYYTYPNLVFIPCKSKIVVYEILSGKMVNVL
KGHFSSVLGVVYNPLSMNLHSFGTDRSFITWIPKKLLVSDLSDEEEEEEETISTARKTSC
SAKTKQQATQDAWSSDED
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgttacgtgaggacttcagtgacttgccagagttacagctctgggggtttaaaccaagt
gatgttaatcttggcactgtgaaaaacttggagaaggtgcgccttggtcaattgtcaagt
tggcggtacagatcgcatgttaaaacatgtcttgctgcaagtcataccttatctgatgtt
acattggaagagaaggaacagtttcctaatgcatttgtgacacatgctgatttggagtgt
gtagacttccgatacttgctgtgtggcttaagcagtggaggtgtggccatatatgacact
tcatctatcaaaaagggtcgaactttcagtgaagttgcttcagttaaaggctgccgaaga
ggaagtcataaatatcaggttgattgtgtccagtggtacccagcagatacaggtttgttt
gtcacctcaagtcaagacaaaaaggttaagatctgggaccctaaccatatgaagccagtt
gaccaattcagcattgactgccacatcctccaccatcatatgtcaccagttgccttcaag
cattcactcttgtctgtggcaggagatactggtgaagttatactgtgtgacctgcgcagt
ggatcttcaactcaccaccttcagggacatgatggagcagttcaagtcacgcagtggtct
cctcgtaatcaatacatcttattgtctggtgggagggatcacactgtgagagtgtgggat
gttcgtgctggacatgcatgcctcagggctcttgatatgaacaactctccccctgagagt
tctagattcaagaagaaaatgaaaaagattcctgaagcccacaaaagtcgtgtgacttct
ctttgttttacacatgatggctcatggttgttgtcatttagctatgatggtgacctgaaa
ttatggaatactgacacttggaagaatatgaatatagattatggggagacatacacggaa
ctcaagaaaaatttgcgtatggcagtctcgtattatacttaccctaatttagtttttata
ccgtgtaagtcaaaaattgtcgtatatgagattttgtctggaaaaatggtaaatgtttta
aagggccacttttcctcagttttaggtgtagtgtacaatcctttatccatgaatttacat
agctttggcactgatcgcagtttcataacatggatcccaaagaagttactggttagtgat
ctctctgatgaagaagaggaagaggaagaaactataagtacagctcgaaaaacaagttgt
tcagcgaagacaaaacaacaagctactcaggatgcatggagcagtgatgaagactga

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