Panulirus ornatus (ornate spiny lobster): 139766244
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Entry
139766244 CDS
T10834
Symbol
Prp8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139766244 (Prp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139766244 (Prp8)
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139766244 (Prp8)
Complex C
U5 SnRNP specific factors
139766244 (Prp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
139766244
NCBI-ProteinID:
XP_071550703
LinkDB
All DBs
Position
57:21259818..21340291
Genome browser
AA seq
2378 aa
AA seq
DB search
MENKMALPPYLIPGSPWAYMAQQQAQLAAAQAQAAHAQMHAHFQAQAQAHSQAQAIPRPQ
AGPPPVETISLEKMQEKARRWQQLHNKKYAEKRKFGFVDVQKEEMPPEHIRKIIRDHGDM
SSRKYRHDKRVYLGALKFMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVI
EPVYISQWSTMWMMMRREKRDRRHFKRMRFPPFDDEEPPLDFADNVLDVEPLEAIQMELD
PEEDIEVADWFYEHKPLIETRHVNGPTYRKWRLTLPQMATLYRLANQLLTDVSDNNYFYL
FDLKSFFTAKALNMALPGGPKFEPLIKDMNPADEDWNEFNDINKIIVRHQVRTEYRIAFP
YLYNNMPQYVHLSWYHTPVVLYIKTEDPDLPAFYFDPLINPISHRNTVKGEILLPDDDED
FELPEDVESLLKEWQLYDDATANGIALLWAPRPFNMRSGTMRRAIDVPLVKMWYREHCPP
GQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTTTLDWVEVGLQVC
RQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLV
VDAHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFN
TGQVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRV
ESHFDLELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIEN
MILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNMGRLTRLYLKSEQERQHNYQKD
GPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLN
QSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKI
TDAYLDQYLWYEADKRRLFPPWVKPGDSEPPPLLVYKWCQGINNLTDVWDTADGECNVML
ESKYEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVDINYKDMNHTNRYGIIRGLQFA
SFIVQYYGLVMDLLVLGLKRAADMAGPPQMPNDFLNFQDVATETQHPIRLYSRYIDRIHI
FFRFTAEEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDI
KNRLPRSVTTINWENSFVSVYSKDNPNLLFNMSGFECRILPKCRMTHEEFKHRDGVWNLQ
NEVTKERTSQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYRES
VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQ
SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWETEFLDSQRVWAEYALKRQEAT
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTH
QRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKK
LTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIF
RAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKW
NYSKPSLLADSKDTMDGSTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSLYPS
PTGVLIAIDLAYNLHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSE
PTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQL
FLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLL
DFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKNISSYTAFSRLI
LILRALHVNNDRTKVLLKPDKTTITEPHHIWPSLSDEDWVKVEVQLKDLILADYGKKNNV
NVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITS
TTSNYETQTFSSKTEWRVRAISATNLHLRTNYIYVSSDDIKETGFTYILPKNVLKKFIII
SDLRTQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQMVHLPHKLPTHEFLNELEPLGW
IHTQPNELPQLSPHDITTHATVMADNSSWTTDRTIVITCSFTPGSCSLQAYKLTPSGFEW
GRNNKDMGNNPKGYLPSHYEKVQMLLSDRFLGLFMTPLQGSWNYNFMGVRHDPNMKYDLQ
LASPKEFYHEIHRPAHFLNFSSLDEADTAGADRDNALE
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagatggcgcttcccccatacctaattccgggcagcccttgggcatacatg
gcccagcagcaggcccagcttgctgctgctcaggcccaggctgcccatgctcagatgcat
gcccatttccaagctcaagctcaggctcactcacaggctcaagcaataccccgcccacag
gctgggccccctccagtagaaactatatccttggagaaaatgcaggagaaagcacgcaga
tggcaacagcttcataacaagaagtatgcagagaagagaaaatttggttttgttgacgtt
cagaaagaggaaatgcccccggaacacattcgtaagattatccgtgatcatggggacatg
tcaagccgaaagtaccgtcatgacaagcgtgtgtaccttggagccctcaagtttatgcct
catgcagtccttaagctgcttgaaaatatgccaatgccatgggagcagataagagatgtc
caggttttgtaccatatcaccggagctattacattcgttaatgagataccatgggtgatt
gagccagtctacatttcccaatggtcaaccatgtggatgatgatgcgacgagaaaagaga
gatcgccggcatttcaagagaatgaggttccctccatttgatgatgaggagcctccttta
gattttgcagacaatgttctggatgtagaaccacttgaagccatccagatggaactggac
cccgaggaagacattgaggttgcagactggttttatgaacacaagccactcatagaaact
cggcatgtgaatggtcctacttatcggaaatggcgattgacacttccacaaatggcaaca
ttgtaccgactagcaaaccagttgttaacagatgtctcagacaacaactacttttatctc
tttgatctaaaatccttcttcacagcaaaggcactgaacatggcactacctggaggacca
aagtttgaacctctgattaaggatatgaatccagcagatgaagactggaatgagttcaat
gatattaacaaaatcattgttcgtcaccaagttcgaacagaatatcgcattgcattccca
tacctttacaataatatgcctcagtatgtccatctcagctggtatcacacaccagttgtc
ctctacatcaaaacagaagatccagacttgcctgccttctactttgatcctctgattaat
cctatctctcaccgtaatacagtgaaaggagagattcttcttcctgatgatgatgaggac
tttgaactgccagaagatgtagaatctctcttgaaggaatggcagctttatgatgatgca
actgcaaatggcatagctttgttgtgggcacctagacctttcaacatgcgatctggcact
atgagaagagcaattgatgtccctttggttaagatgtggtatcgggaacactgcccacca
ggtcagccagttaaggtacgtgtgtcataccaaaagctactgaagtattatgttctcaat
gctctcaagcaccgtccaccgaaagctcagaagaagcgctacttgttccgttccttcaag
gccaccaagtttttccagaccacaaccttagactgggtagaagttggtcttcaggtttgt
cgtcaaggatataacatgcttaaccttctcattcatcgtaaaaacctaaattatctgcat
ttggattacaacttcaacttaaagcctgtcaagacccttaccacaaaagaaagaaaaaag
tcgaggtttgggaatgcatttcacttgtgtcgtgaaattttgaggctaacaaagttggtg
gtggatgctcatgtacagtacagactaaacaatgttgatgcatttcagttagcagatggc
cttcaatatatttttgctcatgttggtcagctgactggcatgtacaggtataagtacaaa
ctcatgagacagattaggatgtgcaaagatcttaagcatgtcatctactacaggttcaac
acaggtcaggtgggcaaaggccctggttgtggattctgggccccaggttggagagtttgg
ctcttcttcatgagaggaattaccccattattggagcgttggctgggtaacctcctttcc
cgtcagtttgagggtcgacatagtaaaggtgtagcaaaaactgtgaccaagcagcgtgtg
gagtctcactttgatcttgaattgcgagcctctgttatgcatgacattttggacatgatg
ccagaaggtattaaacaaaataaagctagaacaattcttcagcacttgtcagaggcatgg
agatgctggaaggccaacatcccatggaaagtacctggtctcccaacgcccattgaaaat
atgattcttcgatatgtaaagatgaaggctgattggtggacaaacactgctcactataac
cgtgaacgtattcgccgtggggcaacagtagataaaactgtttgtaagaagaacatgggg
agacttacacggttgtaccttaaatctgaacaggagcgacaacacaactaccagaaggat
ggtccttatatcagtccagaggaagcagtggctatctacaccaccactgttcattggtta
gaatctcgtcgctttgctcctatccctttcccacctctgtcttacaagcatgacacaaag
cttctcatcctggcattagaaagactaaaggaagcatacagtgtgaaatctcgcttaaat
cagtcccagcgggaggaattgggtctcatagaacaagcttatgataatcctcatgaagca
ctttctcgcatcaaacgtcatttgttgactcaaagagccttcaaagaggtaggcattgaa
ttcatggacctttacagccatttaattcctgtatatgatgtagagcctctcgagaaaatc
acagatgcttacctggatcagtacctctggtatgaagcagacaagcgccgtctgttccca
ccttgggtgaaacctggagactcagaacctcctccacttctggtgtacaagtggtgccaa
ggtataaataacctcactgatgtttgggatacagctgatggagaatgcaatgtaatgctt
gagtcaaaatatgagaaactgtatgaaaagattgatcttacattgcttaacaggctgttg
cgattgattgtggaccataatattgctgattacatgacagctaagaataacgtagacata
aattacaaggatatgaaccacactaatcgttatggtattattagaggtcttcagtttgcc
tcctttattgtccagtattatggtttggtaatggacttgttggtactgggtcttaagcgt
gcagctgacatggctggccccccacaaatgccaaatgactttctgaacttccaggatgtt
gctactgaaacacagcatcctataaggctctactctcgatacattgacagaatacacatc
ttcttccgtttcacagcagaagaggctaaagatcttattcaacggtacctgacagaacac
cctgatccaaataatgaaaacattgttggctataacaacaagaagtgctggccaagagat
gctaggatgaggctcatgaagcatgatgtcaacttaggacgtgctgtcttctgggacata
aagaacagattgcctcgttctgtcaccactatcaactgggagaattcttttgtatctgtt
tattctaaagacaaccctaacttgttattcaacatgtctggatttgaatgtcgtattttg
cctaagtgtcgtatgacacatgaggagtttaaacatagggatggtgtgtggaacttgcaa
aatgaagtaaccaaagagcgaacatctcagtgcttcttgcgagtggatgatgaatccatg
cagaggtttcacaatcgtgtgaggcaaatcctcatggcttcaggttccaccacatttaca
aagattgtaaacaaatggaacacagccttaattggtcttatgacatattacagggagtct
gtggttaacactcaagagctcttagatcttttggtgaaatgtgaaaataaaattcaaact
cgaattaaaattggtcttaattccaagatgccctcaagattccctcctgttgtattttac
acaccaaaggagcttggaggtcttggtatgttgtccatgggtcacgttctcatcccacag
tctgatttgcgatggagtaagcagacagatgttggcataacccatttcagatcgggcatg
agtcatgatgaagaccaacttatccctaacttgtatagatatattcagccatgggagaca
gagttccttgactcccagagagtttgggcagaatatgcccttaagaggcaagaagccact
gcccagaatcgtcgtctcactctggaagatttagaagattcttgggatcggggcattccc
aggattaacacacttttccagaaagatcgtcatactctagcctacgataagggttggaga
attcgtacagaatttaaacagtatcaggtgctgaaacagaatcccttctggtggacacat
cagcgtcatgatggaaagctatggaatttaaataactatcgtactgacatgattcaggcc
ttgggtggtgtagagggtatattagaacacactctcttcaaaggtacatactttccaact
tgggagggtcttttctgggagaaggcctcaggttttgaagagagtatgaagtacaagaaa
cttacaaatgcccaaagatctggtctaaaccagattccaaaccgtcggtttactctctgg
tggtcaccaaccataaacagagccaatgtgtatgtaggtttccaggtacaacttgatctg
actggtatattcatgcatggtaaaattcctaccctaaagatttcgctcatccagatcttt
cgtgcccatctttggcagaagatccatgaatctgtggttatggacctttgtcaggtcttt
gatcaggaacttgatgctctagagattgagactgtgcagaaagaaactattcatcctagg
aagtcatataaaatgaattcctcatgtgcagatatcctgttgtttgcagcttacaagtgg
aactattctaaaccttcactcttggcagattcaaaggacacaatggatgggtcgaccaca
cagaaatattggattgatgtgcaacttagatggggtgactatgattctcatgatgttgaa
cgctatgcaagagcaaaatttttggactacacaactgataatatgtctctgtatccatct
cctacgggtgtattgattgcaattgatctggcttataacttgcatagtgcatatggtaat
tggttcccaggagctaaacccttgattcagcaagccatggcaaagattatgaaagctaat
ccagctctttatgtattgcgtgagcgcatccgtaagggtcttcagctttattcttcagag
cctacagagccatatctctcctcacagaattatggtgaacttttttctaatcagattatt
tggtttgtagatgatactaatgtgtacagggtaactattcacaagacttttgaaggtaat
ctcacaacaaaaccaatcaatggggcaattttcatttttaaccctcgcactggtcagctc
tttttgaaaataattcacacttctgtatgggcaggccagaaacgtcttggtcagttagcc
aaatggaaaacagctgaggaagttgcagctttgattagatcgttacctgttgaagaacag
cctaaacagatcattgtgactcgcaaaggtatgttagatcctcttgaggttcatttgctg
gacttccctaacattgtgattaaaggctctgagctgcagttgcccttccaggcatgttta
aaggtggagaaatttggagacttgatcttgaaagctactgagccacagatggttttgttt
aatttgtatgatgattggctgaaaaacatctcttcctatactgccttttctcgtcttata
ctgatattgcgtgccctccatgttaataatgatcgtacaaaggtccttctcaaaccagac
aaaaccaccatcacagaacctcaccatatctggccatccctttcagatgaagactgggtt
aaggttgaggtgcagctgaaagatctcatacttgctgactatggtaaaaagaataacgta
aatgtagcatctctcacacagtcagagattagagatattattttaggaatggagatcagt
gcaccatcagcccaaagacagcagattgcagaaattgagaaacaaactaaggagcagtcc
cagcttactgccacaactaccagaactgttaacaaacatggggatgagatcattacatct
accaccagcaattatgaaactcaaacattcagcagcaaaacagaatggagagtaagagca
atatctgctacaaacctccatctgcgtactaattacatttatgtatcatctgatgatata
aaggaaactggtttcacatatatcttacccaaaaatgtattgaaaaagtttatcatcata
tcggatcttcgtactcaaattgctggttacctttatggtgtaagtcctccagacaaccct
caagtgaaggagattcggtgtattgtaatgccaccacaatgggggacacatcaaatggta
catctaccacataagcttcctacacatgagttcctaaatgagttggagcctttagggtgg
attcacactcagcccaatgagttaccacagctctcccctcacgatatcaccacacatgcc
acagtcatggctgataatagttcatggaccacagaccgcacaattgttattacatgttca
tttacacctggttcctgctctttacaggcatacaagctcactccatctggctttgaatgg
ggtcgcaacaacaaagatatgggcaataatcccaagggttatttgccatcccattatgag
aaagttcaaatgcttctttcagatcgtttccttggtctttttatgactccattacaaggt
tcttggaactataatttcatgggggtacgccatgatcctaacatgaagtatgatttacaa
ttagccagtccaaaagagttctatcatgaaattcatcgtccagctcacttcctgaacttc
tcatctctggatgaggcagatacagctggggcagatagagacaatgctttagagtaa
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integrated database retrieval system
