Panulirus ornatus (ornate spiny lobster): 139766566
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Entry
139766566 CDS
T10834
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139766566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139766566
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139766566
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
139766566
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
139766566
NCBI-ProteinID:
XP_071551479
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Position
58:complement(15753373..15764241)
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AA seq
290 aa
AA seq
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MVDINLSDAEKRYIVDGVKLGIRVDGRDRLDYRQLEIETDLVSTANGSARVRLDRTDVLI
TVKMEMEPPPPEQPNNGQLHFFVNCSANAAPEFEGRGGADLATSLSAMLERVYSSPHTLN
TSKLCVVPGKHVKVLYVDIEILECGGNLFDAVSLGVKAALWATKMPRIYITGEDGGELEF
SVSDNPCDVDRIDVSNAPILITHLRITENLTVVDPTPEEECCGPVQVVVGVTPQGLITAT
QQFGAGTFTPQTLNASLKSARDLGVKIHQRIMEMLRQEEKIVDRQIKGFL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggtagacataaacctaagtgatgcagaaaaaagatatatcgttgatggagtaaagctc
ggtattcgtgtggatggtagagatcgattggattaccggcagctggagatagaaactgat
ttagtttctacagctaatggttcagctcgagttaggcttgaccgtacagatgtcttgatt
acagtcaaaatggagatggagccaccaccaccagagcaacccaacaatggacaactccac
ttctttgtcaattgttctgccaatgctgcaccagagtttgaaggtcgtggaggtgcggac
ttagctactagcttgagtgcaatgttggaaagggtatactcttctcctcataccctgaac
acttctaagctttgtgttgttcctggcaaacatgttaaggtcctatatgttgatattgag
atcctggaatgtggaggaaatttgtttgatgcagtgagcttgggtgtaaaagcagctctc
tgggcaaccaaaatgccaaggatttatatcactggagaagatggtggagagctggagttt
tcagtgtctgataacccgtgtgatgttgacaggattgatgtctccaatgcacctattcta
ataactcacttaagaataacagaaaatttgactgttgttgatccaactcctgaagaggaa
tgctgtggccctgtacaagtagtggttggcgttactccccagggcttaattactgcaact
cagcagtttggcgcagggacatttacccctcagacattgaatgcttccttaaagagtgca
cgagaccttggagttaagatccatcaacggataatggaaatgttacgacaggaggagaaa
attgtggacaggcagataaaagggtttctttag
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