Panulirus ornatus (ornate spiny lobster): 139766824
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Entry
139766824 CDS
T10834
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139766824 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139766824 (Nup54)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139766824 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
139766824
NCBI-ProteinID:
XP_071551852
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Position
58:complement(352309..574395)
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AA seq
565 aa
AA seq
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MSNFSFGTPSAAGSSTGSGGFSFGGTSTGGITSGSTGFSFGTTTGGSTSTTSPFGSAFGA
TNPAVTSSGTAFGSAFGATNPAVTNSGTGFGFLSNFGGGGPKPPAFGLGSLGGITNTVPG
AGCFNFGTSQQAKPACGFGTSTGNTSGTFFIGSGFGRKPTSGFGTQTTDGSQQLQLQQAA
VVQPDPSLALHLAICTPSVFNNENDEVLRKWNQLQAFWGAGKGYYAPNMPPVEFTPENPY
CRFKVVCYARIPNYRNENGIVQIIIGKPPSEVKPHKQQIVSTLTPMFGGAEVVVDEIFAA
EVPDKTNIRLYVQQTLPNGEKQRAAAADVSRYMMGPINTQTLKNLCIQDVIPLLMLTETQ
LKEYLDTPQRGIDPALWEQGKRENPDPKKYFPVVKVGFQELQKQFKYQEEHAKNLQASMN
NIMDEITQLRHKQILVKAAIQNAKWKQANLTRRVLKLVSAQEVERKRGVPLDQTEEQIRM
RLEDLYMQLMQPTQYRGCLNELMAQMSVKPGNSRSGPRYGLVGDKEKEVAQYVAWQHDAL
QAVVGVLKEDIQTVDNMMEEIQRKS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacttcagctttggaacacccagtgctgctggaagttcaacaggatctggaggt
tttagttttgggggaaccagtactggtggtatcacatcaggttcaacaggttttagtttt
ggaaccacaactggaggatcaacatctactacatcaccatttggatcagcttttggtgct
accaacccagcagtgaccagctcaggaacagcttttgggtcagcttttggtgcaaccaac
ccagcagtgaccaattcaggaacagggtttggttttctgtctaactttggtggagggggc
cccaagccaccagcctttggtcttgggagtcttggaggaattactaatacagtaccagga
gcgggttgctttaactttgggaccagtcagcaagccaagcctgcatgtggatttggaaca
tctactggtaacacatcaggaacgtttttcataggttcaggatttggaagaaaaccgaca
tcaggatttgggactcagactacagatggttctcagcagcttcagttacaacaggcggca
gtagtacaaccagatccctcgttggcattacatcttgctatatgcacaccctcagtcttt
aataatgaaaatgatgaagttttacgcaagtggaaccaactacaggccttctggggtgct
gggaaaggttactatgctcccaatatgcctcccgtagagttcacaccagaaaatccatac
tgccgcttcaaggtagtgtgttatgctaggattccaaactaccgtaatgaaaatggtatt
gtacaaatcattattggaaagcccccttcagaagtaaagccccacaagcaacaaattgtg
tcaaccttgactccaatgtttggtggtgctgaggtagttgttgatgaaatctttgctgct
gaagtccctgataaaacaaatattcggctgtatgttcagcagactctccctaatggagag
aagcaacgagcagctgctgctgatgtctctcgctacatgatggggccaataaatactcag
acattaaagaatttatgcattcaggatgttattccattgttgatgttaacagagactcag
ttaaaggaatacctggatacaccccagagagggattgacccagcattatgggagcaaggc
aagagagagaatccagaccctaagaagtattttcctgttgttaaagttggctttcaggaa
ctacagaaacaattcaagtatcaggaagagcatgctaaaaatcttcaggcaagcatgaac
aacatcatggatgaaatcacacagctaagacataagcagattttggtgaaggctgccatt
cagaatgccaagtggaaacaagcaaatctcacacgtagagttctgaagttggtgtcagca
caagaagtagagcgcaaaagaggggtgccacttgaccagacagaggagcagattcgcatg
cgacttgaggacctgtatatgcagctcatgcagcctacacaataccggggatgtttgaat
gaacttatggcgcagatgtctgtcaagccaggaaattcccgtagtggtccacgctatggt
cttgttggtgataaggaaaaagaagttgcacagtatgtggcatggcagcatgatgctctt
caagcagtggttggtgttctaaaagaagacatacaaacggttgataatatgatggaggaa
atacaacgtaaatcttaa
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