Panulirus ornatus (ornate spiny lobster): 139766950
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Entry
139766950 CDS
T10834
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
porn03016
]
139766950
Enzymes [BR:
porn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
139766950
Transfer RNA biogenesis [BR:
porn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139766950
Prokaryotic type
139766950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
SHOCT_2
DUF3151
SHOCT
Motif
Other DBs
NCBI-GeneID:
139766950
NCBI-ProteinID:
XP_071552120
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All DBs
Position
4:66670436..66820912
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AA seq
475 aa
AA seq
DB search
MAINIGFTRCKNLMRLACCMIPWLAKCQCSRATGIWHQSLADSTVVSVKDRNNNVILILR
GLSMKQVSQPDVMEAQVKHIKLDPVPDLSTPAVQRRKFALLLSFCGKGYHGMQKNEYFRS
IENDLLGAMLAANLITEEEYKIPQLFYFQRVSRTDKGVSAARLLVSASLPGNVPNMKEEI
SKHLCDQIRVMATYRTTRAFNCKLWCDSRTYSYLCPTFAFAPFTEITREGYRMTPEVLKE
VRRLLNMYKGTHNFHNFTSQIRPQEARAIRNIIDIDCGKPFISDSLEWITIRIRGQSFVL
HQIRKMIGLIMAISRGLADANFITEALTENYVNLPIAPALGLVLEEQHFDYYNKKFGSDG
IHEPLKWDKSEKSIQKFREQYISASIVNTEIQEKSMLKWLTILHFHAYEIYSASSEIKDK
NQLKEKHSQVKSPIWYAYRRLGYHRTLENSEDNNCDDDDDDDDDDVGHHQLLTDS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaacataggatttacaagatgtaagaatttaatgagattagcttgttgtatg
ataccatggctggcaaaatgccagtgttctcgtgccactggaatctggcaccagtcccta
gcagattctacagtggtttccgtaaaggatagaaacaataatgttatattaatccttaga
ggtttaagtatgaaacaggtatctcagcctgatgtgatggaagctcaggtaaaacacatc
aagctagatcctgtgcctgatcttagtactccagcagtacagagaaggaaatttgctctg
ctcctctcattctgtggcaagggctatcatggcatgcaaaagaatgaatatttcagaagt
atagaaaatgatttgcttggtgccatgcttgcagcgaacctgattacagaggaagaatac
aaaattccacagttattttactttcaacgagtttctcgaacagacaaaggtgtttctgca
gctagactgttggtgtctgcttctcttcctggaaatgtgcctaatatgaaggaagaaatc
agtaaacacttgtgtgatcagatccgtgtgatggctacatatcgaactacaagggctttt
aactgcaaattatggtgtgactcacgcacttattcatatttgtgcccaacatttgccttt
gctccttttacagagataaccagagagggttaccgcatgacaccagaagttttgaaagaa
gttagaagattgctgaatatgtataaaggcacccacaatttccacaattttacatctcaa
ataagaccccaggaagcacgtgctatccgtaatattattgatatagactgtgggaaacca
ttcataagtgacagtttagaatggatcaccatcagaattagaggtcagagttttgtgtta
caccaaattcgtaaaatgattggtttgatcatggccataagtcgaggactggctgatgcc
aacttcatcactgaagctttaactgagaactacgttaatttgcctattgctccagcactt
ggtcttgtgctagaggagcaacattttgattattataacaagaaatttggatctgatggt
attcatgagccccttaaatgggataagtcagaaaagagcatccaaaaattccgtgagcag
tacatcagtgcatcaatagtgaacacagaaatccaggaaaagtcaatgcttaaatggctg
accatactgcatttccatgcctatgaaatctattcagcctcatcagaaattaaggataag
aatcagctcaaggaaaaacattcccaagtgaaatctcccatatggtatgcatatagaaga
ttaggttatcatagaacattagaaaacagtgaggacaacaactgtgatgatgatgatgat
gatgatgatgatgatgtgggacatcatcagttgctgactgattcctga
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