Panulirus ornatus (ornate spiny lobster): 139767259
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Entry
139767259 CDS
T10834
Symbol
Irbp
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
139767259 (Irbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139767259 (Irbp)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139767259 (Irbp)
Spliceosome [BR:
porn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139767259 (Irbp)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
139767259 (Irbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
HeH
SAP
SDE2_2C
Ish1
Motif
Other DBs
NCBI-GeneID:
139767259
NCBI-ProteinID:
XP_071552521
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All DBs
Position
59:23510386..23544255
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AA seq
610 aa
AA seq
DB search
MDDWKFDGTEDSEGEEDSEGSSWFDGGRTATVFLIDAAEEMFKAQEEDTGEGEEAPFHRA
MRAAHATLMRKIISNNQDLLSVVLFNTRETKNPIDFAHVYILQELERSGAENVLMLEKLI
EMDGNRFDVKYGRNTNASLQDALRVCQTVFNKCTNRLSGQSILLFTCRDDPHAGDDQKKR
QARRKVQDLKEAGIVLEILHMGETFDVKKFYKDLIIPDESEDDEDSQEKITLADPTSRFD
ELMERVRRLDHKQRTTGRVLFTLAPGVEMSVGVYTAVRKMNKPSKVNLWKNTNEELRYMK
KEYLEETGEILVPSDYVKYQTYGGRKIKFTLDEVRSMARIHDPEIKLLGFKPISSIKPYY
HVRPGNFIYPDEKSVQGSKKMFAALLERCLARKMAAIVRLVTRKGASVSWAALIPQKEEL
DRKNCQVTPPGFIACHLPFADDFRNIQIENTIRATPDQVDAAKAVIKKLHFKYSPDSFDN
PDIQTHWRNIEALALNRSHLEPVPDYTVPDYERMQKKAGMFLQKFQDLVYPPSYDPNESV
KKRPAPKSTPAPKRAKPDPGSIDVEAMAKAGKADKLTMDILKAWLQERGVKVSGKKKAQL
VQDVMDEVEV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggacgattggaaatttgatggtactgaagactcagaaggtgaagaggatagcgaagga
agttcttggtttgatgggggtcgcacggctactgttttccttattgatgctgccgaggaa
atgtttaaggctcaagaggaggatactggagaaggagaggaggcaccatttcatagagct
atgagagcagctcatgctactttgatgcggaaaataatttcaaataatcaagatctcctg
tctgtagtcttgttcaacactagagagactaagaatcctattgacttcgcccatgtatat
atattgcaagaattagaacgttcaggtgctgaaaatgttctcatgctagaaaagttaata
gaaatggatggaaacagatttgatgtgaaatatggccgcaataccaatgccagtttgcaa
gatgccttgagagtctgccagactgtcttcaataaatgcacaaatcggttgtcagggcag
agcatcttgttatttacttgtcgagatgacccacatgctggtgatgatcagaaaaaaaga
caagctcgaagaaaggtccaagatttaaaggaagctgggattgtgctggaaatcctacat
atgggggaaacctttgatgtgaagaaattttacaaggatttgattatacccgatgagagt
gaagatgatgaggactcgcaagaaaagattacactggcagatcccacaagcagatttgat
gaactgatggagagagtgaggcgacttgatcataaacagcgcaccactggaagagtttta
tttactctggccccaggggtagaaatgtcagttggagtctacactgcagtgaggaaaatg
aacaagccatctaaagtgaacctgtggaagaacacaaatgaagaattgagatacatgaaa
aaggaatatttagaggaaacaggtgaaatattggtgccatctgactatgtgaaataccag
acatacggtggcaggaaaattaaattcactctggatgaggtgcgtagcatggctcgtatt
catgatccagaaataaagcttcttgggttcaaaccaatcagtagtatcaagccatattat
catgtcagacctggaaactttatttacccagatgaaaaatcagtccaaggtagtaagaag
atgtttgcagctttgctggagcgttgcttggctcgtaaaatggctgcaatagtacgactg
gtgacacgtaaaggtgcctcagtgtcttgggcagcactgatccctcaaaaagaggaactt
gataggaagaattgtcaagtcaccccaccaggtttcattgcatgtcatttgccatttgct
gatgatttccgcaacatacaaatagagaacacaatccgtgctacccctgatcaagtggat
gcagccaaagctgtcattaagaaattacatttcaagtattctcctgatagctttgacaat
cctgatattcagacccactggcgcaacattgaggccttagcccttaacaggtctcatcta
gagccagtgccagactacactgtacctgattatgagcgcatgcaaaagaaggctggcatg
tttcttcaaaaatttcaagaccttgtgtatccaccttcatatgaccctaacgagtctgtc
aaaaagcggccagcccccaaatctaccccagctccaaaaagagccaaaccagatccgggg
agtattgatgttgaggccatggccaaagctggtaaggctgacaaattgaccatggacata
ttgaaggcttggctacaggaacgaggagtgaaagtctcagggaagaagaaagctcaactt
gttcaggatgtcatggatgaagttgaagtgtag
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