Porphyromonas sp. oral taxon 275: J4862_00095
Help
Entry
J4862_00095 CDS
T08761
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4862_00095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porp03019
]
J4862_00095
03009 Ribosome biogenesis [BR:
porp03009
]
J4862_00095
Enzymes [BR:
porp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J4862_00095
Messenger RNA biogenesis [BR:
porp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4862_00095
Ribosome biogenesis [BR:
porp03009
]
Prokaryotic type
rRNA helicases
J4862_00095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
RecG_N
Motif
Other DBs
NCBI-ProteinID:
QUB43070
LinkDB
All DBs
Position
complement(22290..24113)
Genome browser
AA seq
607 aa
AA seq
DB search
MTFESLGVSAPICRAVAEKGYEQPMPVQEAVIPHLLGEPMDLIALAQTGTGKTAAFGLPL
LQNVARSLETEGGKPSGLARALVLCPTRELCLQIADDLTDYSKYLPSVRILPVYGGSSIE
AQIRTLRRGVEVIVATPGRLIDLMERGAASLDEVHTVVLDEADEMLTMGFSESLQTILSQ
VPEERHLLLFSATMPREISSIAASYMHQPKEIIVGTKNQGNANIKHYYYVVSARHKYLAL
KRIADYYPDIYGIIFCRTRKETQEIADQLIRDGYNADALHGELSQAQRDYVMQKFRIRNL
QLLVATDVAARGLDVNDLTHVIHYGLPDDIESYTHRSGRTARAGKMGISIAICHSRERGR
LRDIERISHATIERRTLPTGAEICGKQLFHLAERIERVELTEDATLEALLPELARKLEWI
DHEELLKRVMLLEFRRMLDYYEQEEAIEEADERGRLQGDGEGKKRDKRNAVAEEGMKRLF
INFGKLDRMFPNKLIELINKCVPGRVKVGKIDLLPRFAFFEVDEHEASEVIHSMSSYEVD
GRRIVVDYADKVGEGGGKRERRGAPSKRRDYDKPAGRRDEDYGKRGGGYGKRSRSYDEGP
RSKKKRW
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaatccctgggagtctccgctcccatctgtcgcgccgtagccgagaagggc
tacgagcagcccatgcccgtgcaggaggcagtgatcccgcacctcctcggtgagcctatg
gacctcatcgccctggcccagacggggacgggtaagacggcggccttcggcctgccgctg
ctgcagaatgtagctcgtagcctcgagactgagggcggcaagccctcgggcctagcacgt
gccctcgtcctctgccctacgcgtgagctctgcctgcagatcgccgacgacctcaccgac
tacagcaagtacctcccctccgtgcgtatcctccccgtctatggcggctcctcgatcgag
gcgcagatacgcacgctccgccgtggggtagaggtcatcgtcgctacccctgggcgcctc
atcgacctcatggagcgcggcgccgcttcgctggacgaggtgcatacggtcgtcctcgac
gaggctgacgagatgctcacgatgggcttctccgagagcctgcagaccatcctcagccag
gtgcccgaggagcgtcacctgctgctcttctccgcgaccatgccccgcgagatcagctcc
atcgctgcctcctacatgcaccagcccaaggagatcatcgtcgggacgaagaaccagggc
aacgccaacatcaagcactactactacgtcgtatcggcgcggcacaagtaccttgccctc
aagcgcatcgccgactactaccccgacatctacgggatcatcttctgccgcacgcgcaag
gagacccaggagatcgccgaccagctgatccgcgacggctacaatgccgatgcgctgcac
ggcgagctctcgcaggcgcagcgtgactacgtgatgcagaagttccgcatccgcaacctc
cagctcctcgttgctaccgacgtggccgcccgcggcctcgacgtcaacgacctgacgcac
gtcatccactacggtctgcccgacgatatcgagagctacacgcaccgcagcggccgtacg
gcgcgcgcaggcaagatggggatctccatcgccatctgccacagccgtgagcgtggtcgc
ctgcgcgacatcgagcgcatctcccatgctacgatcgagcgcaggacgctgcccacaggg
gcggagatctgcggcaagcagctcttccacctagcggagcgcatcgagcgcgtcgagctg
acggaggacgctacgctcgaggcactgctgcccgagctggcacgcaagctcgagtggatc
gaccatgaggagctactcaagcgcgtgatgctcctcgagttccgccgtatgctcgactac
tatgagcaggaggaggccatcgaggaggccgatgagcgcggccgcctgcagggcgacggt
gagggcaagaagcgcgacaagcgcaatgccgtcgccgaggaggggatgaagcgtctcttc
atcaacttcggtaagctggaccgcatgttccccaataagctcatcgagctgatcaacaag
tgtgtccctggccgcgtcaaggtcgggaagatcgacctcttgcctcgcttcgccttcttc
gaggtcgacgagcatgaggcctcggaggtcatccacagcatgagcagctacgaggtagac
ggccgccgtatcgtcgtggactatgccgacaaggtcggtgagggcggcggtaagcgtgag
cgccgcggcgcccccagcaagcgccgtgactacgacaagcccgcggggcgtcgcgatgag
gactacggcaagcgtggcggtggctatggcaagcgctcccgcagctacgacgaaggccct
cgcagcaagaagaagcgctggtag
DBGET
integrated database retrieval system
