Porphyromonas sp. oral taxon 275: J4862_00865
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Entry
J4862_00865 CDS
T08761
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03410
Base excision repair
porp03430
Mismatch repair
porp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4862_00865 (recJ)
03430 Mismatch repair
J4862_00865 (recJ)
03440 Homologous recombination
J4862_00865 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_00865 (recJ)
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J4862_00865 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J4862_00865 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J4862_00865 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
RdRP_1
Motif
Other DBs
NCBI-ProteinID:
QUB43862
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All DBs
Position
224317..225987
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AA seq
556 aa
AA seq
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MGRLLVERGVRSVEEAERFFHPRLEELHDPFLMQDMQAAVARLSLALERRDKILIYGDYD
VDGTTAVALLYRYLRAYCAPDQLRYHIPDRYDEGYGVTSARVAEAAEAGVQLIIAVDTGT
KAVEEVAYARTLGVDFIICDHHKPDETLPQAVALLNPKRADNTYPFTELSGCGLAFKLLQ
GLAQQLGHPLSQLFAHLELLVLSIAQDRVSILGENRILCYHGLRQLNTSPSVGISYLMRR
GKVRLGHVDMASIYYELGPRINAAGRMAHGAESVKLLIAEDARTAEAQSQILDDYNRQRQ
DLDQEVTRQALALVESQPALLERKILVLYHPEWNKGVMGIVAARLADRLHRPVIILARSG
DWLAGSARSSGGFDLYAAIQACEDCLENFGGHTFAAGMTVHPDRLELFAERIEAYAHTAG
EQARFLPTLEVDAELQPQEITKTLLRQLDMLYPFGTNNERPLFMTHRLRDAGGSRAVGRS
LQHLNLRLTDYYQRIRPLHGFALGGARYAGALARHEAFALCYELEENNFYAQSFLQLRVK
DICLEGELEQRLLPSR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcctcctggtcgagcgcggcgtgcgctcggtggaggaggcggagcgcttcttc
catccgcgcctcgaggagctgcacgatcccttcctcatgcaggacatgcaggccgctgtg
gcgcgcctcagcctcgcgctggagcgtcgggacaagattctcatctacggcgactacgat
gtcgacggcaccacggccgtggcgctgctctatcgctatctccgtgcttactgtgccccc
gaccagctgcgctaccatatccccgaccgctatgacgagggctacggcgtcacctcggcg
cgcgtggctgaggccgccgaggcaggtgtccagctcatcatcgccgtagatacgggtact
aaggccgtcgaggaggtagcctacgcccgcacgctcggcgtcgacttcatcatctgcgat
caccataagcccgacgagacgctgccgcaggctgtggcgctcctcaatcccaagcgagct
gacaatacctatcccttcaccgagctctcgggatgcggactggccttcaagctcctgcag
ggactggctcagcagctcgggcatccgctgagtcagcttttcgcccacctagagctcctc
gtgctgagcattgcccaggatcgcgtgtccatcctcggggagaaccgcatcctctgctac
catggcctgcgccagctcaatacctccccctcggtcggcatctcctatctcatgcgtcgt
ggcaaggtgcgcctggggcatgtggatatggccagcatctactacgagctaggcccgcgc
atcaatgccgcagggcgcatggcgcacggggctgagtccgtcaagctcctcatcgccgag
gacgcccgcacggccgaggctcagagccagatcctcgacgactacaatcgccagcgtcag
gacctcgatcaggaggtcacgcgccaggcgctggcgctggtggagagccagcccgccctc
ttggagcgcaagatcctcgtcctctaccaccccgagtggaacaagggcgtcatgggtatt
gtggcggcacgcctagcggaccgactgcaccgccccgtcatcatcctcgcgcgctcgggc
gactggctcgcgggctcggcgcgtagctcgggaggcttcgacctctatgctgcgatacag
gcctgtgaggactgtctggagaacttcggcgggcataccttcgccgcgggaatgaccgtt
caccccgaccgtctcgagctcttcgccgagcgcatcgaggcctatgcccatacggcgggt
gagcaggcgcgcttcctgcccaccctcgaggtcgacgccgagctccagccgcaggagatt
accaagacgctgctgaggcagctggacatgctctatcccttcggtacgaacaatgagcgc
ccgctcttcatgacacaccgcctgagggacgcgggcggctcgcgcgcggtcggccgcagc
ctgcagcacctcaacctccgcctgacggactactaccagcgcatacgtccgctgcacggc
ttcgccctcggtggcgctcgctacgcaggggccttggcgcgccacgaggccttcgcgctg
tgctacgagctcgaggagaacaacttctacgcccagagcttcctgcagctgcgcgtcaag
gatatctgcctcgagggtgagctggagcagcgcctcctccctagccgctag
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integrated database retrieval system
