Porphyromonas sp. oral taxon 275: J4862_02030
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Entry
J4862_02030 CDS
T08761
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp00521
Streptomycin biosynthesis
porp00523
Polyketide sugar unit biosynthesis
porp00541
O-Antigen nucleotide sugar biosynthesis
porp01100
Metabolic pathways
porp01110
Biosynthesis of secondary metabolites
porp01250
Biosynthesis of nucleotide sugars
Module
porp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
J4862_02030 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J4862_02030 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J4862_02030 (rfbC)
Enzymes [BR:
porp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
J4862_02030 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QUB43428
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Position
522494..523054
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AA seq
186 aa
AA seq
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MKILNTAIPEVKILEPRLFEDARGYFFESFNERLFAELVAPVHFVQDNESRSSYGVVRGL
HFQCGEAAQAKLVRVIRGRVLDVAVDVRRGSPTFGQHVAVELTEDNHRQLFIPRGFAHGF
SVLSEEVIFQYKCDNYYAPEAEGAIAWDDPALGIDWRIPHERVILSAKDSAHPRLSEATK
LAEYIR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctaaatactgctatccccgaggtcaagatcctcgagccgcgcctcttcgag
gatgcccgcggctacttcttcgagtccttcaatgagcgcctcttcgccgagctcgtagca
cccgtacacttcgtccaggacaatgagagccgctccagctacggcgtcgtgcgcggcctt
cacttccagtgcggcgaggcggcgcaggccaagctggtgcgcgtcatccgtggccgtgtg
ctggacgtggcggtagacgtgcggcggggctcgcccaccttcgggcagcacgtggccgta
gagctgacggaggataatcaccgccagctcttcatcccccgcggcttcgcccacggcttc
agtgtgctgagcgaggaggtcatcttccagtacaagtgcgacaactactacgcccccgag
gccgagggcgctattgcctgggatgatcccgcgctagggatcgactggcgcatcccgcac
gaacgggtgatcctctcggccaaggacagtgctcacccccgcctctcggaggccaccaag
ctagccgagtacatccgatga
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