KEGG   Porphyromonas sp. oral taxon 275: J4862_02030
Entry
J4862_02030       CDS       T08761                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
porp  Porphyromonas sp. oral taxon 275
Pathway
porp00521  Streptomycin biosynthesis
porp00523  Polyketide sugar unit biosynthesis
porp00541  O-Antigen nucleotide sugar biosynthesis
porp01100  Metabolic pathways
porp01110  Biosynthesis of secondary metabolites
porp01250  Biosynthesis of nucleotide sugars
Module
porp_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:porp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    J4862_02030 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    J4862_02030 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    J4862_02030 (rfbC)
Enzymes [BR:porp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     J4862_02030 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: QUB43428
LinkDB
Position
522494..523054
AA seq 186 aa
MKILNTAIPEVKILEPRLFEDARGYFFESFNERLFAELVAPVHFVQDNESRSSYGVVRGL
HFQCGEAAQAKLVRVIRGRVLDVAVDVRRGSPTFGQHVAVELTEDNHRQLFIPRGFAHGF
SVLSEEVIFQYKCDNYYAPEAEGAIAWDDPALGIDWRIPHERVILSAKDSAHPRLSEATK
LAEYIR
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaagatcctaaatactgctatccccgaggtcaagatcctcgagccgcgcctcttcgag
gatgcccgcggctacttcttcgagtccttcaatgagcgcctcttcgccgagctcgtagca
cccgtacacttcgtccaggacaatgagagccgctccagctacggcgtcgtgcgcggcctt
cacttccagtgcggcgaggcggcgcaggccaagctggtgcgcgtcatccgtggccgtgtg
ctggacgtggcggtagacgtgcggcggggctcgcccaccttcgggcagcacgtggccgta
gagctgacggaggataatcaccgccagctcttcatcccccgcggcttcgcccacggcttc
agtgtgctgagcgaggaggtcatcttccagtacaagtgcgacaactactacgcccccgag
gccgagggcgctattgcctgggatgatcccgcgctagggatcgactggcgcatcccgcac
gaacgggtgatcctctcggccaaggacagtgctcacccccgcctctcggaggccaccaag
ctagccgagtacatccgatga

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