Porphyromonas sp. oral taxon 275: J4862_02295
Help
Entry
J4862_02295 CDS
T08761
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J4862_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_02295
Enzymes [BR:
porp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J4862_02295
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J4862_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Ectoine_synth
Motif
Other DBs
NCBI-ProteinID:
QUB43475
LinkDB
All DBs
Position
complement(576488..577870)
Genome browser
AA seq
460 aa
AA seq
DB search
MEDSANLRSFSLSELLRSVRRCIEHTYPTRYWVRAEVSDLRRSGAGGHGYLELLEKGAGG
DIVARVRATIWSTAYQQIERALAQQGLGSLSSGMNVLALVSLSYHELYGLSLNIADIDPR
YSLGELARLRQETIARLKRQGLLEMNKELELPEPLQRLAIISSPTAAGYGDFMRQIEANS
YGVKLYTALFRAQMQGEQTTDSILSALERILRYQEHFDAVVIIRGGGAVSELRAFDDYRL
CESCAQYPLPIITGIGHERDVSVLDLVAHSSFKTPTAVASYLIEGLATELGRVAYCSERL
PRLLERLSLGRGQSLQLLSSRLQQTAQRSIARAQYSLTQQQSQLGLQTQATLRRADFQLG
QLGRRLPDLLRLRLQEAHQELHRPLLRLPLLLEHLRSRSYQQLEHYEQAIRLSHPDNILR
RGFSIVKRAGQIQTSASELRKGEELELCFYQDSIRVRVEG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagcgcgaacctccgctccttcagcctcagcgagctcctccgctcggtgcga
cgctgcatcgagcacacctacccgacacgctactgggtacgtgctgaggtgagcgaccta
aggcgctctggcgcgggaggccatggctacctcgagctcctagagaagggagctgggggc
gatatcgtcgcgcgcgtacgcgctactatatggagtacagcctaccagcagatcgagcgg
gcactcgcccagcaggggctaggcagtctcagctcggggatgaacgtgctggcgctggtc
agtctcagctaccacgagctctatggactaagccttaacatcgccgacatcgacccccgc
tactccctcggcgagctcgcacgcctccgacaggagaccatagcccgcctaaagcgacag
gggctcctcgagatgaacaaggagctggagctccccgagccgctgcagcgtctggcgatc
atctcctcgcccaccgcagcgggctacggggacttcatgcggcaaatcgaggccaatagc
tacggggtcaagctctataccgccctcttccgtgcgcagatgcagggggagcagacgacg
gactccatcctctcagccctcgagcgtatacttaggtaccaggagcacttcgacgccgtg
gtcatcatccgaggcgggggcgccgtcagcgagctgcgcgccttcgacgactaccgcctc
tgcgagagctgcgcccagtaccccctccccatcatcaccggtataggccacgagcgagac
gtctccgtcctcgacctggtggcccatagctcgttcaagacaccgacggccgtcgctagc
tacctcatcgaggggcttgcgaccgagctaggacgcgtcgcctactgcagcgagcgccta
ccccgactcctagagcgcctctccctggggcgcggccaaagcctacagctactgagcagc
cgcctgcagcagactgcacagcgcagcatcgctcgggcacagtacagcctcacccagcag
cagtcgcagctaggcctacagacccaggccaccctacgccgagcggacttccagctggga
cagcttgggcgccgccttcccgatctacttcgcctacgcctacaggaggcccatcaggag
ctgcaccgcccgctgctgcgccttccactgctactcgagcatctacgcagtcgcagctat
cagcagctagagcactacgagcaggcgatacggctctcccaccccgacaacattctacgg
cgaggcttcagcatcgtcaagcgcgctggccagatccagacctcggccagcgaactgcgg
aagggcgaggaactggagctctgcttctaccaagattcaatacgcgtacgcgtagagggc
tag
DBGET
integrated database retrieval system
