Porphyromonas sp. oral taxon 275: J4862_02530
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Entry
J4862_02530 CDS
T08761
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
porp
Porphyromonas sp. oral taxon 275
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
QUB43516
LinkDB
All DBs
Position
complement(634346..635866)
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AA seq
506 aa
AA seq
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MSPYSRRTRRVLALTLALLISIPVLAQSKRIREHEVVREETVYSISRRYNVPIEKIYELN
PWARTQIKVGDKLLIPSEATSHSSTNPKAESRKHIVAAGETLYRISKNYGIELEQLLRAN
PGVTSSNVKVGMELVIPSPEAEQSATASPAPEPQSVEIASNQVAKAQVRVALLLPLTKGR
RYVEFYEGFLLGMYELKKTGVSIQLTTLDTPTDDALSGHIAQGKLRDMDLVFGGVNEQQI
GALARAGGYRYYVVPFSRVDGLELGAGNSAVLVNAHPEYLIDRVIPSFLHRYKGREVVFV
KRSSDSEDLFAQELRKALRSAGLPHRSIELGGQSPTLGTTAVLVPVSADRNLAQATISYL
ERQSSANLTLFGYPQWQSFGGGFQRSLSRYNATIYSSFFFDPTTSESRDFLTQYNHWFSH
KIDNTYPKYSVLGYDLARYFIRAYSLYGQGFVKHLNSLPSDGLQLDIYPKVTFTDEQDGV
RRSVYTNTRCYLVTYKSSGTIQRDAI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcccatactctaggcggacgcgccgcgtcctagccctcaccctagccctcctcatc
agcatccccgtcctagcacagagcaagcgcatccgcgagcatgaggtcgtacgcgaggag
accgtctacagcatctcccgacgctacaatgtccccatagagaagatctacgagctgaat
ccctgggcacgtacccagatcaaggtcggggacaagctcctgatcccaagcgaggcgacg
agccacagcagcaccaaccccaaggccgagagccgcaagcatatcgtagccgctggcgag
acgctctaccgcatcagtaagaactatggcatcgagctggagcagctcctgcgtgccaat
cccggcgtcacctcctccaatgtcaaggtaggcatggagctcgtcatccccagccccgag
gccgagcagtccgccacggccagccctgcccctgagcctcagagcgtagagatcgcctcc
aaccaggtggccaaggcgcaggtacgcgtggcgctgctgctaccgctcacgaagggacgc
cgctacgtagagttctacgagggcttcctcctcggcatgtacgagctcaagaagacgggc
gtcagcatccagctgaccacgctcgacacgccgacagacgacgcgctctcggggcacatc
gcgcagggcaagctgcgggatatggatctcgtcttcggcggggtcaatgagcagcagatc
ggtgccctagcacgcgcgggcggctaccgctactatgtcgtccccttcagccgcgtcgac
gggctggagctcggggcggggaactcggccgtcctcgtcaacgcacaccccgagtacctg
atcgaccgcgtcatcccgagcttcctacatcgctacaagggacgtgaagtcgtcttcgtc
aagcgcagcagcgacagcgaggacctcttcgcccaggagctgcgcaaggccctacgcagc
gctggcctcccccaccgctccatcgagctcggcgggcagagcccgaccctaggcacgacg
gccgtcctcgtacccgtctcagcggatcgcaacctcgcgcaggctaccatcagctacctt
gagcgccagagctcggcgaaccttaccctcttcggctacccacagtggcagtccttcggg
ggcggcttccagcgtagccttagccgctacaatgcgacgatctactcgagcttcttcttc
gacccgacgaccagcgagtcgcgcgacttcctcacgcagtacaatcactggttcagccac
aagatcgacaacacctaccccaagtacagcgtccttggctacgacctagcccgctacttc
atccgcgcctactcactctacgggcaaggcttcgtcaagcacctcaactccctaccctcg
gacgggctgcaactggatatctaccccaaggtgaccttcaccgacgagcaggatggcgta
cgccgcagcgtctataccaacacccgctgttacctggtcacctacaagtcctcgggcacc
atccagcgtgatgctatctag
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