Porphyromonas sp. oral taxon 275: J4862_03700
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Entry
J4862_03700 CDS
T08761
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
porp
Porphyromonas sp. oral taxon 275
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porp03009
]
J4862_03700 (rimO)
Enzymes [BR:
porp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J4862_03700 (rimO)
Ribosome biogenesis [BR:
porp03009
]
Prokaryotic type
ribosomal protein modification factors
J4862_03700 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QUB43732
LinkDB
All DBs
Position
complement(928469..929770)
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AA seq
433 aa
AA seq
DB search
MRKNKVDVITLGCSKNLVDSEQLIRQFLANGYKVQHNSPTVNGEIVVLNTCGFIGDAQEE
SINMILSMVEAKKQGRIGQVYVMGCLTERFMDELKAEIPEVDGYYGKFNWKNLLTDLGKA
YHHDPLGGNRSITTPSHYAYMKISEGCNRSCSYCAIPLITGKHQSRPMEELVAEAESLVA
SGVKEIQLIAQDLTFYGLDRYKKNSLAELMQRLSDVKGLEWLRLHYAYPADFPREILSVM
RERENICNYLDIALQHISDPMLEQMRRRVTKAETYELLGYMRESVPGLHLRTTLMTGHPG
ETEQDFEELLQFVRDIRFDRMGAFVYSHETGTFAYDKYEDDIPLAVKQERMDRLMSTQEE
IATELNAAKVGKTFKVLIDRAEDEYYIGRTEYDSPEVDQEVLVTKETELTVGNFYPIEIT
SADTFDLYGQFKA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaataaagtcgacgttatcactctaggctgctccaagaatctagtggactcg
gagcagctcatccgccagttcctggcaaacggttacaaggtccagcacaattcgcccaca
gtcaacggagagatcgttgtcctcaatacctgcggcttcatcggtgatgcccaggaggag
tcgatcaacatgatcctcagcatggtcgaggccaagaagcaggggcgcatcgggcaggtc
tatgtcatgggctgcctcacggagcgcttcatggacgagctcaaggcagagatccccgag
gtcgatggctactatggcaagttcaactggaagaacctccttaccgacctcgggaaggcg
taccaccacgacccactcgggggcaatcgtagcatcacgaccccatcccactacgcctat
atgaagatctcggagggctgcaaccgcagctgctcctactgtgctatcccgctcatcacg
ggcaagcatcagtctcgccccatggaggagctggtcgctgaggccgagtccctcgtagcc
tcgggcgtcaaggagatccagctcatagcccaggaccttaccttctatggcctcgaccgc
tacaagaagaacagcctagccgagctcatgcagcggctctctgatgtcaaagggctcgag
tggctacgcctgcactacgcctatcccgcggactttcctcgcgagatcctcagcgtgatg
cgggagcgtgagaacatctgcaactacctcgacatagccctacagcatatcagtgacccc
atgctggaacagatgcgtcgccgcgtgacgaaggcggagacctacgagctgctcggctat
atgcgcgagtccgtccctggcctgcacctgcgtacgacgctgatgacgggacacccaggg
gagacggagcaggacttcgaggagctcctgcagttcgtccgtgatattcgcttcgatcgc
atgggtgccttcgtctactcacacgagacggggaccttcgcctatgacaagtacgaggat
gacatcccccttgctgtgaagcaggagcgtatggatcgactgatgagcactcaggaggag
atcgccaccgagctcaatgcagcaaaggtaggcaagaccttcaaggtcctcatcgataga
gccgaggatgagtactacatcgggcgcaccgagtacgactcccccgaggtcgatcaggag
gtcctggtcactaaggagaccgagctcacggtggggaacttctaccccatcgagatcacc
tccgccgacacctttgatctctacggacaattcaaggcctag
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