Porphyromonas sp. oral taxon 275: J4862_03795
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Entry
J4862_03795 CDS
T08761
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
porp
Porphyromonas sp. oral taxon 275
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porp03032
]
J4862_03795
03036 Chromosome and associated proteins [BR:
porp03036
]
J4862_03795
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_03795
DNA replication proteins [BR:
porp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J4862_03795
Chromosome and associated proteins [BR:
porp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J4862_03795
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J4862_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
DSBA
Motif
Other DBs
NCBI-ProteinID:
QUB43751
LinkDB
All DBs
Position
complement(954884..955153)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKTDFIAGVAEKAGLTKEQARKAVDAFAAVVAEELQKGEKVSLLGFGTFSVQDKPAREG
INPATKAKIKIPARKAVKFKAGAALDLNA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgatttcatcgcaggcgtagctgagaaggctggtctgaccaaggaacag
gctcgcaaggctgttgatgcattcgcagcagtagtcgcagaggagctgcagaagggtgag
aaggtctctctcctaggcttcggtaccttctccgttcaggataagcccgctcgcgaaggc
atcaatcccgccaccaaggcaaagatcaagatccccgcacgcaaggcggtcaagttcaag
gctggcgcagctctcgacctgaacgcttaa
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