Porphyromonas sp. oral taxon 275: J4862_04125
Help
Entry
J4862_04125 CDS
T08761
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4862_04125 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_04125 (ruvB)
Enzymes [BR:
porp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4862_04125 (ruvB)
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4862_04125 (ruvB)
RecFOR pathway proteins
J4862_04125 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_3
TIP49
AAA_16
TsaE
Rad17
AAA_14
nSTAND3
AAA_18
NB-ARC
RNA_helicase
AAA_24
NTPase_1
Bac_DnaA
AAA_17
NPHP3_N
NACHT
AAA_28
Sigma54_activ_2
ABC_tran
AAA_33
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QUB43809
LinkDB
All DBs
Position
complement(1045587..1046630)
Genome browser
AA seq
347 aa
AA seq
DB search
MPYPDSFDIRNQEVLPQEEQDIDKALRPLSFASFSGQDKAVENLKVFVQAAKLRSDALDH
VLLYGPPGLGKTTLSHIIASELGVGIKVTSGPVLDKPGDLAGLLTSLEPNDVLFIDEIHR
LSPVVEEYLYSAMEDYRIDIMLDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGI
NLHLEYYDVQTLAGIVLRSAELLGSPCDTSAAVEVASRSRGTPRIANALLRRVRDFAQVK
GDGRIDQAIASYALEALNIDRYGLDYIDNKLLGVIIDKFAGGPVGLSTIATALGEDSGTI
EEVYEPFLIKEGFIKRTPRGREATDLAYSHLGRTPRVRPASIFFDEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccctatcccgatagcttcgacatacgcaatcaagaggtgctcccgcaggaggagcaa
gatatagacaaggcgctacgcccgctgtccttcgctagcttcagcggtcaagacaaggcc
gtggagaatctcaaggtcttcgtccaagccgctaagctgcgctccgacgcactagaccac
gtcctgctgtatggccctccggggctgggcaagacgaccctctcacacatcatcgcctcg
gagctcggggtcggcatcaaggtgacctcaggcccagtgctcgataagcctggggatctc
gcggggctcttgacctccctcgagcccaacgatgtgctcttcatcgacgagatccatcgc
ctcagtcccgtcgtagaggagtacctctactccgccatggaggactaccgcatcgatatc
atgctggacaagggccccagtgctcgctccatacagatcgacctcaatcccttcaccctc
gtcggagccacgacgcgtagcggcctcttgacggcgcccctgcgagcccgcttcggcatc
aacctccacctcgagtactacgatgtacagacgctggcggggatcgtcctacgctcggcc
gagctcctcggtagcccttgtgatacgagcgctgccgtcgaggtggcctcacgtagccgc
gggacgccgcgtatcgccaacgccctgctgcgccgcgtccgtgacttcgctcaggtcaag
ggcgacggacgcatcgaccaagccatcgccagctatgccctcgaggccctgaatatcgac
cgctacggcctggactatatagacaacaagctactgggtgtcatcatcgataagttcgcg
ggcggtcccgtcggtctgagcacgatcgccacggcgctcggtgaggactcggggacgatc
gaggaggtctacgagcccttcctcatcaaggagggcttcatcaagcgcacgcctcgcggc
cgtgaggcgacagacctcgcctacagccacctcgggcgtacgccccgtgtacgaccagcc
agcatcttcttcgacgaggagtag
DBGET
integrated database retrieval system
