Porphyromonas sp. oral taxon 275: J4862_04435
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Entry
J4862_04435 CDS
T08761
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4862_04435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porp03021
]
J4862_04435
Transcription machinery [BR:
porp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4862_04435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_53
IF2_N
NPH3
dCache_3
Motif
Other DBs
NCBI-ProteinID:
QUB42267
LinkDB
All DBs
Position
complement(1112256..1113119)
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AA seq
287 aa
AA seq
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MRQLKISKSITNRESASLDRYLQEIGREELISIEEEVELAQAIKRGDRRALDKMTRANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQAILQALAE
QARIVRLPLNQVGTLNKISKALAKFEQENERRPSAEELAKELNLPEDKITETLKVAGRHI
SVDAPFVEGEENSLLDVLTSDDTPSTDSVLLDESLSSEINQVLTNLTEREAEIVKCFFGI
CGYPEMTLDEIGMKYDLTRERVRQIKEKAIRKLRNDIHCASLKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaagatatcgaagtccatcaccaatcgagagagtgcctcgctcgaccgc
tacctgcaggagataggtcgcgaggagctcatcagcatagaggaggaggtagagcttgcc
caggcgatcaagcggggcgatcgccgagccctggataagatgacccgagccaatctgcgc
ttcgtcgtctccgtcgccaagcagtaccagaaccaaggcctcagcctccccgacctcatt
aatgaggggaacctcgggctgatcaaggcggccgagaagttcgacgagacgcgcggcttc
aagttcatctcctacgccgtctggtggatacgccaggcgatcctccaggcactggctgag
caggcgcgtatcgtacgtctgccgctcaatcaggtcgggacgctcaacaagatctccaag
gccttggctaagttcgagcaggagaacgagcgccgcccctcggccgaggagctggctaag
gagcttaacctccccgaggacaagatcaccgagacgctcaaggtcgcagggcggcatatc
tccgtcgatgccccttttgtcgagggagaggagaatagcctcctggacgtactgaccagt
gacgacaccccctcgacggatagcgtactgctcgatgagtcgctcagcagcgagatcaac
caggtgctgacgaacctcaccgagcgtgaggccgagatcgtcaagtgcttcttcggcatc
tgcggctaccccgagatgacgctcgatgagatagggatgaagtacgatctgacgcgcgag
cgcgtgcgccagattaaggagaaggctatacgcaagctgcgcaacgatatacactgcgcc
tccctcaagccatacctcggctag
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integrated database retrieval system
