Porphyromonas sp. oral taxon 275: J4862_05050
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Entry
J4862_05050 CDS
T08761
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
porp
Porphyromonas sp. oral taxon 275
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porp03032
]
J4862_05050 (gyrA)
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_05050 (gyrA)
Enzymes [BR:
porp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J4862_05050 (gyrA)
DNA replication proteins [BR:
porp03032
]
Prokaryotic type
DNA Topoisomerases
J4862_05050 (gyrA)
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4862_05050 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF488
Fungal_virus_P2_N
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
QUB42376
LinkDB
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Position
complement(1245626..1248241)
Genome browser
AA seq
871 aa
AA seq
DB search
MQDREDRIIDITIEDEMKSAYIDYSMSVIVSRALPDVRDGFKPVHRRVLYAMNEDGNTYD
KPTRKCASAVGQVMKYYHPHGDSSIYGTLVRLAQPWNLRYPLVQGQGNFGSIDGDSPAAM
RYTESRLNKLASEMLRDIEKDTVDFQNNFDDSTTEPTVLPARFPNLLVNGSAGIAVGMAT
NMAPHNLGESIDACVAYIDSKGDIDVAGLMSYIKAPDFPTGGFIYGYAGVREAFETGRGR
IIIRSRCEIEVHNNHERIIVTEIPYQVNKSELVKSIADLINDKKLDGISGIADESNRKGI
RIVIDVKRDANSGVVLNKLYKMTALQSSFSVNNIALVKQRPEDRQGRPQLLNLRDLIHHF
IEHRHDVVYRRTQYDLRKAEERVHILEGLIIAVDNIDEVIRIIRAASEPQEAIEQLMVRF
NLSLLQARAIVDMRLRALTGLERDKLRAEYEALVKEIAHLKALLADKELRAALIREELLE
IKEKYADERRSEIIYAAEEFNPEDFYADDEMIITISHHGYIKRTPLSEFRSQARGGVGAK
GSDTRDEDFIEYIYSASMHATMLLFTQMGRCYWLKVYEIPEGAKNTKGRALQNLLNFEPG
DRVNAFIRVKNLTKDQDFVSSHYLLFCTKRGVIKKTLLEAYSRPRANGIIAINLAEGDQL
VDVALTNGRKEVLIANRNGRAVRFAEDAVRATGRNAMGVRGMTLDEDGRDEVVGMLAVEA
DTEETILVVSEQGYGKRSLVEDYRKTNRGTKGVKTLNITDKTGELVAFSAITDEHDLMII
NRSGITIRVHARDISVQGRATQGVRIIDLKKRGDEIASVCRVLTEEDEPELSEELDPTAT
SVAPELAEGTATQDQLPQELLDRAMDEDLNK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatcgcgaagataggatcatagatatcacgatcgaggacgagatgaagtcggcc
tacatagactactctatgtcggtcatcgtctcccgtgctctgcctgatgtacgtgacggc
ttcaagcccgtacatcgtcgtgtgctctatgcaatgaatgaagacgggaatacctacgac
aagcctacgcgtaagtgcgccagcgccgtcgggcaggtgatgaagtactatcacccccac
ggggactcctccatctatgggacgctggtacgcctggctcagccgtggaacctccgctac
cccctcgtccagggacagggtaacttcggctccatcgacggggactcgcccgctgctatg
cgttacaccgagtcgcgcctgaataagctcgccagcgagatgctgcgcgacatcgagaag
gatacggtagacttccagaacaacttcgacgactccacgacggagcccacggtactgccc
gcgcgcttccccaacctcctggtcaatggctcggcagggatcgccgtaggtatggccacc
aatatggctccgcacaacctcggggagtccatcgacgcctgtgtcgcctacattgacagc
aagggcgatatcgacgtggctggcctgatgagctacatcaaggcccccgacttcccgacg
ggaggcttcatctacggctatgctggagtccgtgaggccttcgagaccggccgtggccgc
atcatcatccgcagccgctgcgagatcgaggtgcacaataatcacgagcgcatcatcgtc
accgagatcccctaccaggtcaataagtccgagctcgtcaagagtatcgccgacctgatc
aatgacaagaagctggacggcatctcgggtatcgccgacgagtcgaaccgtaaggggata
cgcatcgtcatcgatgtcaagcgcgatgccaactcgggcgtcgtcctcaacaagctctat
aagatgacggcgctgcagagctccttcagtgtcaacaatatcgcgctggtcaagcagcgc
cccgaggacagacagggtcgcccccagctgctgaacctgcgcgacctgatccatcacttc
atcgagcaccgccacgacgtcgtctaccgccgcacgcagtacgacctgcgcaaggccgag
gagcgcgtccacatcctcgaggggctgatcatcgccgtagacaatatcgacgaggtcatc
cgcatcatccgcgctgcgagcgagccccaggaggccatcgagcagctgatggtgcgcttc
aacctctcgctcctgcaggcacgtgccatcgtagatatgcgtctgcgtgccctcaccggc
ctcgagcgtgacaagctgcgtgccgagtacgaggccttggtcaaggagatcgcgcacctc
aaggccctcttggccgacaaggagctgcgcgccgccctcatccgtgaggagctgctggag
atcaaggagaagtacgccgacgagcgtcgcagcgagatcatctacgcagccgaggaattc
aatcccgaggacttctacgccgatgacgagatgatcatcaccatctcgcaccacggctat
atcaagcgtacgccgctgagcgagttccgctcccaggcgcgcggcggtgttggtgccaag
ggcagcgacacgcgcgacgaggacttcatcgagtacatctactcggcctcgatgcacgcc
acgatgctgctcttcacccagatggggcgctgctactggctcaaggtctacgagatcccc
gagggggcgaagaacaccaagggccgtgccctgcagaacctcctcaacttcgagcctggc
gaccgcgtcaatgccttcattcgcgtcaagaacctgacgaaggatcaggacttcgtcagc
tcgcactacctgctcttctgcaccaagcgcggggtcatcaagaagaccctgctggaggct
tactcccgcccccgtgccaacgggatcatcgccatcaacctcgccgagggcgaccagctg
gtggatgtcgcgctgaccaacgggcgcaaggaggtgctcatcgccaaccgcaacggtcgc
gcggtgcgcttcgccgaggatgccgtacgtgccactgggcgtaatgctatgggggtacgt
ggtatgacgctcgatgaggacggccgcgacgaggtcgtcgggatgctcgccgtcgaggcc
gacaccgaggagacgatcctcgtagtcagtgagcagggctatggcaagcgctccctcgtc
gaggactaccgcaagaccaaccgcggcaccaagggcgtcaagacgctcaacatcaccgac
aagacaggtgagctggtggccttcagcgcgatcaccgatgagcatgacctgatgatcatc
aaccgcagcggcattaccatccgtgtccatgctcgcgacatcagcgtgcagggacgtgct
acccagggggtacgcatcatcgacctcaagaagcgtggcgacgagatcgcctctgtctgc
cgtgtgctgaccgaggaggacgagcccgagctctctgaggagctagacccaacagctacg
tccgtagcccccgagctcgctgagggcacagccactcaggaccagctcccccaggagctg
ctcgacagagctatggacgaagatctcaataagtaa
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